RNA–Protein interactions for RNA: ENST00000468116.1

HBP1-206, Transcript of HMG-box transcription factor 1, humanhuman

TSL 4

Gene HBP1, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBP1-206ENST00000468116 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
HBP1-206ENST00000468116 ABCC9O60706 1549 aa29.45■■■□□ 2.3
HBP1-206ENST00000468116 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
HBP1-206ENST00000468116 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
HBP1-206ENST00000468116 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
HBP1-206ENST00000468116 NACADO15069 1562 aa27.48■■□□□ 1.99
HBP1-206ENST00000468116 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
HBP1-206ENST00000468116 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
HBP1-206ENST00000468116 DCAF8L2P0C7V8 631 aa27.12■■□□□ 1.93
HBP1-206ENST00000468116 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
HBP1-206ENST00000468116 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
HBP1-206ENST00000468116 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
HBP1-206ENST00000468116 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
HBP1-206ENST00000468116 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
HBP1-206ENST00000468116 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
HBP1-206ENST00000468116 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
HBP1-206ENST00000468116 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
HBP1-206ENST00000468116 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
HBP1-206ENST00000468116 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
HBP1-206ENST00000468116 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
HBP1-206ENST00000468116 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
HBP1-206ENST00000468116 CUX2O14529 1486 aa25.68■■□□□ 1.7
HBP1-206ENST00000468116 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
HBP1-206ENST00000468116 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
HBP1-206ENST00000468116 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
HBP1-206ENST00000468116 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
HBP1-206ENST00000468116 NESP48681 1621 aa25.13■■□□□ 1.61
HBP1-206ENST00000468116 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
HBP1-206ENST00000468116 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
HBP1-206ENST00000468116 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
HBP1-206ENST00000468116 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
HBP1-206ENST00000468116 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
HBP1-206ENST00000468116 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
HBP1-206ENST00000468116 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
HBP1-206ENST00000468116 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
HBP1-206ENST00000468116 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
HBP1-206ENST00000468116 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
HBP1-206ENST00000468116 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
HBP1-206ENST00000468116 WDR62O43379 1518 aa24.56■■□□□ 1.52
HBP1-206ENST00000468116 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
HBP1-206ENST00000468116 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
HBP1-206ENST00000468116 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
HBP1-206ENST00000468116 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
HBP1-206ENST00000468116 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
HBP1-206ENST00000468116 WIZO95785 1651 aa24.24■■□□□ 1.47
HBP1-206ENST00000468116 CFTRP13569 1480 aa24.16■■□□□ 1.46
HBP1-206ENST00000468116 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
HBP1-206ENST00000468116 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
HBP1-206ENST00000468116 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.46
HBP1-206ENST00000468116 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
HBP1-206ENST00000468116 ARHGEF11O15085 1522 aa24■■□□□ 1.43
HBP1-206ENST00000468116 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
HBP1-206ENST00000468116 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
HBP1-206ENST00000468116 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
HBP1-206ENST00000468116 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
HBP1-206ENST00000468116 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
HBP1-206ENST00000468116 CYB5RLQ6IPT4 315 aa23.82■■□□□ 1.4
HBP1-206ENST00000468116 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
HBP1-206ENST00000468116 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
HBP1-206ENST00000468116 TRHP20396 242 aaPredicted RBP23.74■■□□□ 1.39
HBP1-206ENST00000468116 CHD1O14646 1710 aa23.72■■□□□ 1.39
HBP1-206ENST00000468116 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
HBP1-206ENST00000468116 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
HBP1-206ENST00000468116 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
HBP1-206ENST00000468116 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
HBP1-206ENST00000468116 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
HBP1-206ENST00000468116 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.37
HBP1-206ENST00000468116 FBLN2P98095 1184 aa23.54■■□□□ 1.36
HBP1-206ENST00000468116 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
HBP1-206ENST00000468116 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
HBP1-206ENST00000468116 RAD54L2Q9Y4B4 1467 aa23.37■■□□□ 1.33
HBP1-206ENST00000468116 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
HBP1-206ENST00000468116 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
HBP1-206ENST00000468116 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
HBP1-206ENST00000468116 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
HBP1-206ENST00000468116 SOGA1O94964 1423 aa23.33■■□□□ 1.33
HBP1-206ENST00000468116 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
HBP1-206ENST00000468116 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
HBP1-206ENST00000468116 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
HBP1-206ENST00000468116 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
HBP1-206ENST00000468116 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
HBP1-206ENST00000468116 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
HBP1-206ENST00000468116 CUX1P39880 1505 aa23.12■■□□□ 1.29
HBP1-206ENST00000468116 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
HBP1-206ENST00000468116 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
HBP1-206ENST00000468116 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
HBP1-206ENST00000468116 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
HBP1-206ENST00000468116 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
HBP1-206ENST00000468116 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
HBP1-206ENST00000468116 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
HBP1-206ENST00000468116 CEP170Q5SW79 1584 aa22.92■■□□□ 1.26
HBP1-206ENST00000468116 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
HBP1-206ENST00000468116 NUP160Q12769 1436 aa22.89■■□□□ 1.25
HBP1-206ENST00000468116 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
HBP1-206ENST00000468116 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
HBP1-206ENST00000468116 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
HBP1-206ENST00000468116 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.235e-6■■■■■ 29.2
HBP1-206ENST00000468116 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
HBP1-206ENST00000468116 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
HBP1-206ENST00000468116 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms