RNA–Protein interactions for RNA: ENST00000467244.1

IGSF1-207, Transcript of immunoglobulin superfamily member 1, humanhuman

TSL 2

Gene IGSF1, Length 849 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF1-207ENST00000467244 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
IGSF1-207ENST00000467244 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
IGSF1-207ENST00000467244 ABCC9O60706 1549 aa25.24■■□□□ 1.63
IGSF1-207ENST00000467244 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
IGSF1-207ENST00000467244 NACADO15069 1562 aa24.19■■□□□ 1.46
IGSF1-207ENST00000467244 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
IGSF1-207ENST00000467244 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
IGSF1-207ENST00000467244 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
IGSF1-207ENST00000467244 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
IGSF1-207ENST00000467244 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
IGSF1-207ENST00000467244 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
IGSF1-207ENST00000467244 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
IGSF1-207ENST00000467244 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
IGSF1-207ENST00000467244 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
IGSF1-207ENST00000467244 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
IGSF1-207ENST00000467244 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
IGSF1-207ENST00000467244 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
IGSF1-207ENST00000467244 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
IGSF1-207ENST00000467244 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
IGSF1-207ENST00000467244 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
IGSF1-207ENST00000467244 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
IGSF1-207ENST00000467244 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
IGSF1-207ENST00000467244 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
IGSF1-207ENST00000467244 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
IGSF1-207ENST00000467244 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
IGSF1-207ENST00000467244 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
IGSF1-207ENST00000467244 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
IGSF1-207ENST00000467244 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
IGSF1-207ENST00000467244 WIZO95785 1651 aa21.98■■□□□ 1.11
IGSF1-207ENST00000467244 NESP48681 1621 aa21.8■■□□□ 1.08
IGSF1-207ENST00000467244 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
IGSF1-207ENST00000467244 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
IGSF1-207ENST00000467244 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
IGSF1-207ENST00000467244 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
IGSF1-207ENST00000467244 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.06
IGSF1-207ENST00000467244 CUX2O14529 1486 aa21.69■■□□□ 1.06
IGSF1-207ENST00000467244 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
IGSF1-207ENST00000467244 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
IGSF1-207ENST00000467244 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
IGSF1-207ENST00000467244 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
IGSF1-207ENST00000467244 CFTRP13569 1480 aa21.44■■□□□ 1.02
IGSF1-207ENST00000467244 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
IGSF1-207ENST00000467244 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
IGSF1-207ENST00000467244 WDR62O43379 1518 aa21.37■■□□□ 1.01
IGSF1-207ENST00000467244 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
IGSF1-207ENST00000467244 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
IGSF1-207ENST00000467244 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
IGSF1-207ENST00000467244 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
IGSF1-207ENST00000467244 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
IGSF1-207ENST00000467244 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
IGSF1-207ENST00000467244 ABCC8Q09428 1581 aa21■□□□□ 0.95
IGSF1-207ENST00000467244 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
IGSF1-207ENST00000467244 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
IGSF1-207ENST00000467244 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
IGSF1-207ENST00000467244 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
IGSF1-207ENST00000467244 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
IGSF1-207ENST00000467244 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
IGSF1-207ENST00000467244 CUX1P39880 1505 aa20.8■□□□□ 0.92
IGSF1-207ENST00000467244 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
IGSF1-207ENST00000467244 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
IGSF1-207ENST00000467244 CHD1O14646 1710 aa20.71■□□□□ 0.91
IGSF1-207ENST00000467244 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
IGSF1-207ENST00000467244 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
IGSF1-207ENST00000467244 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
IGSF1-207ENST00000467244 SOGA1O94964 1423 aa20.66■□□□□ 0.9
IGSF1-207ENST00000467244 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.9
IGSF1-207ENST00000467244 PBRM1Q86U86 1689 aa20.64■□□□□ 0.9
IGSF1-207ENST00000467244 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
IGSF1-207ENST00000467244 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
IGSF1-207ENST00000467244 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
IGSF1-207ENST00000467244 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
IGSF1-207ENST00000467244 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
IGSF1-207ENST00000467244 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
IGSF1-207ENST00000467244 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
IGSF1-207ENST00000467244 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
IGSF1-207ENST00000467244 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
IGSF1-207ENST00000467244 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
IGSF1-207ENST00000467244 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
IGSF1-207ENST00000467244 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
IGSF1-207ENST00000467244 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
IGSF1-207ENST00000467244 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
IGSF1-207ENST00000467244 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
IGSF1-207ENST00000467244 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
IGSF1-207ENST00000467244 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
IGSF1-207ENST00000467244 FBLN2P98095 1184 aa20.38■□□□□ 0.85
IGSF1-207ENST00000467244 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
IGSF1-207ENST00000467244 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
IGSF1-207ENST00000467244 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
IGSF1-207ENST00000467244 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
IGSF1-207ENST00000467244 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
IGSF1-207ENST00000467244 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
IGSF1-207ENST00000467244 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
IGSF1-207ENST00000467244 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
IGSF1-207ENST00000467244 CUL7Q14999 1698 aa20.18■□□□□ 0.82
IGSF1-207ENST00000467244 NUP160Q12769 1436 aa20.16■□□□□ 0.82
IGSF1-207ENST00000467244 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
IGSF1-207ENST00000467244 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
IGSF1-207ENST00000467244 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
IGSF1-207ENST00000467244 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
IGSF1-207ENST00000467244 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms