RNA–Protein interactions for RNA: ENST00000465018.1

XPO4-203, Transcript of exportin 4, humanhuman

TSL 3

Gene XPO4, Length 367 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO4-203ENST00000465018 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
XPO4-203ENST00000465018 ABCC9O60706 1549 aa30.53■■■□□ 2.48
XPO4-203ENST00000465018 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
XPO4-203ENST00000465018 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
XPO4-203ENST00000465018 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
XPO4-203ENST00000465018 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
XPO4-203ENST00000465018 NACADO15069 1562 aa28.26■■■□□ 2.11
XPO4-203ENST00000465018 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
XPO4-203ENST00000465018 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
XPO4-203ENST00000465018 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
XPO4-203ENST00000465018 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
XPO4-203ENST00000465018 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
XPO4-203ENST00000465018 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
XPO4-203ENST00000465018 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
XPO4-203ENST00000465018 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
XPO4-203ENST00000465018 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
XPO4-203ENST00000465018 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
XPO4-203ENST00000465018 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
XPO4-203ENST00000465018 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
XPO4-203ENST00000465018 DCAF1Q9Y4B6 1507 aa26.94■■□□□ 1.9
XPO4-203ENST00000465018 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
XPO4-203ENST00000465018 CUX2O14529 1486 aa26.69■■□□□ 1.86
XPO4-203ENST00000465018 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
XPO4-203ENST00000465018 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
XPO4-203ENST00000465018 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
XPO4-203ENST00000465018 NESP48681 1621 aa26■■□□□ 1.75
XPO4-203ENST00000465018 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
XPO4-203ENST00000465018 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
XPO4-203ENST00000465018 HMGXB3Q12766 1538 aa25.84■■□□□ 1.73
XPO4-203ENST00000465018 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
XPO4-203ENST00000465018 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
XPO4-203ENST00000465018 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
XPO4-203ENST00000465018 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
XPO4-203ENST00000465018 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
XPO4-203ENST00000465018 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
XPO4-203ENST00000465018 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
XPO4-203ENST00000465018 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
XPO4-203ENST00000465018 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
XPO4-203ENST00000465018 WDR62O43379 1518 aa25.36■■□□□ 1.65
XPO4-203ENST00000465018 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
XPO4-203ENST00000465018 CADPSQ9ULU8 1353 aa25.29■■□□□ 1.64
XPO4-203ENST00000465018 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
XPO4-203ENST00000465018 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
XPO4-203ENST00000465018 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.61
XPO4-203ENST00000465018 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.61
XPO4-203ENST00000465018 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.61
XPO4-203ENST00000465018 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
XPO4-203ENST00000465018 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
XPO4-203ENST00000465018 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
XPO4-203ENST00000465018 CFTRP13569 1480 aa24.83■■□□□ 1.56
XPO4-203ENST00000465018 WIZO95785 1651 aa24.78■■□□□ 1.56
XPO4-203ENST00000465018 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
XPO4-203ENST00000465018 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
XPO4-203ENST00000465018 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
XPO4-203ENST00000465018 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
XPO4-203ENST00000465018 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
XPO4-203ENST00000465018 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
XPO4-203ENST00000465018 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
XPO4-203ENST00000465018 CHD1O14646 1710 aa24.45■■□□□ 1.5
XPO4-203ENST00000465018 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
XPO4-203ENST00000465018 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
XPO4-203ENST00000465018 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
XPO4-203ENST00000465018 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.49
XPO4-203ENST00000465018 FBLN2P98095 1184 aa24.31■■□□□ 1.48
XPO4-203ENST00000465018 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
XPO4-203ENST00000465018 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
XPO4-203ENST00000465018 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
XPO4-203ENST00000465018 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
XPO4-203ENST00000465018 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
XPO4-203ENST00000465018 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
XPO4-203ENST00000465018 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
XPO4-203ENST00000465018 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
XPO4-203ENST00000465018 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
XPO4-203ENST00000465018 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
XPO4-203ENST00000465018 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
XPO4-203ENST00000465018 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
XPO4-203ENST00000465018 SOGA1O94964 1423 aa23.98■■□□□ 1.43
XPO4-203ENST00000465018 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
XPO4-203ENST00000465018 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
XPO4-203ENST00000465018 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
XPO4-203ENST00000465018 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
XPO4-203ENST00000465018 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
XPO4-203ENST00000465018 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
XPO4-203ENST00000465018 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
XPO4-203ENST00000465018 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
XPO4-203ENST00000465018 CUX1P39880 1505 aa23.69■■□□□ 1.38
XPO4-203ENST00000465018 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
XPO4-203ENST00000465018 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
XPO4-203ENST00000465018 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
XPO4-203ENST00000465018 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
XPO4-203ENST00000465018 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
XPO4-203ENST00000465018 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
XPO4-203ENST00000465018 NUP160Q12769 1436 aa23.56■■□□□ 1.36
XPO4-203ENST00000465018 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
XPO4-203ENST00000465018 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
XPO4-203ENST00000465018 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
XPO4-203ENST00000465018 FAM69CQ0P6D2 419 aa23.46■■□□□ 1.35
XPO4-203ENST00000465018 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
XPO4-203ENST00000465018 DIP2BQ9P265 1576 aa23.39■■□□□ 1.33
XPO4-203ENST00000465018 KDM6BO15054 1643 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms