RNA–Protein interactions for RNA: ENST00000464887.1

AUP1-205, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 2

Gene AUP1, Length 845 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-205ENST00000464887 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
AUP1-205ENST00000464887 AEBP2Q6ZN18 517 aaPredicted RBP30.91■■■□□ 2.54
AUP1-205ENST00000464887 CCDC180Q9P1Z9 1646 aa30.37■■■□□ 2.45
AUP1-205ENST00000464887 ABCC9O60706 1549 aa30.05■■■□□ 2.4
AUP1-205ENST00000464887 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
AUP1-205ENST00000464887 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
AUP1-205ENST00000464887 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
AUP1-205ENST00000464887 NACADO15069 1562 aa28.62■■■□□ 2.17
AUP1-205ENST00000464887 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
AUP1-205ENST00000464887 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
AUP1-205ENST00000464887 UNC13AQ9UPW8 1703 aa28.11■■■□□ 2.09
AUP1-205ENST00000464887 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
AUP1-205ENST00000464887 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.096e-7■□□□□ 10.6
AUP1-205ENST00000464887 BICRAQ9NZM4 1560 aa27.85■■■□□ 2.05
AUP1-205ENST00000464887 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
AUP1-205ENST00000464887 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
AUP1-205ENST00000464887 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
AUP1-205ENST00000464887 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
AUP1-205ENST00000464887 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.94
AUP1-205ENST00000464887 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
AUP1-205ENST00000464887 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
AUP1-205ENST00000464887 BAZ1AQ9NRL2 1556 aaPredicted RBP26.42■■□□□ 1.82
AUP1-205ENST00000464887 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
AUP1-205ENST00000464887 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
AUP1-205ENST00000464887 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
AUP1-205ENST00000464887 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
AUP1-205ENST00000464887 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
AUP1-205ENST00000464887 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
AUP1-205ENST00000464887 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
AUP1-205ENST00000464887 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
AUP1-205ENST00000464887 WIZO95785 1651 aa26■■□□□ 1.75
AUP1-205ENST00000464887 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
AUP1-205ENST00000464887 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
AUP1-205ENST00000464887 NESP48681 1621 aa25.92■■□□□ 1.74
AUP1-205ENST00000464887 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
AUP1-205ENST00000464887 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
AUP1-205ENST00000464887 CUX2O14529 1486 aa25.67■■□□□ 1.7
AUP1-205ENST00000464887 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
AUP1-205ENST00000464887 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
AUP1-205ENST00000464887 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
AUP1-205ENST00000464887 KIF21AQ7Z4S6 1674 aa25.6■■□□□ 1.69
AUP1-205ENST00000464887 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
AUP1-205ENST00000464887 CFTRP13569 1480 aa25.42■■□□□ 1.66
AUP1-205ENST00000464887 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
AUP1-205ENST00000464887 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.65
AUP1-205ENST00000464887 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
AUP1-205ENST00000464887 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
AUP1-205ENST00000464887 WDR62O43379 1518 aa25.27■■□□□ 1.64
AUP1-205ENST00000464887 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
AUP1-205ENST00000464887 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
AUP1-205ENST00000464887 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
AUP1-205ENST00000464887 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
AUP1-205ENST00000464887 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
AUP1-205ENST00000464887 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
AUP1-205ENST00000464887 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
AUP1-205ENST00000464887 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
AUP1-205ENST00000464887 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
AUP1-205ENST00000464887 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
AUP1-205ENST00000464887 TARBP1Q13395 1621 aaKnown RBP24.66■■□□□ 1.54
AUP1-205ENST00000464887 CUX1P39880 1505 aa24.66■■□□□ 1.54
AUP1-205ENST00000464887 EIF4G3O43432 1585 aaKnown RBP24.64■■□□□ 1.54
AUP1-205ENST00000464887 SOGA1O94964 1423 aa24.64■■□□□ 1.54
AUP1-205ENST00000464887 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
AUP1-205ENST00000464887 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
AUP1-205ENST00000464887 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
AUP1-205ENST00000464887 AQRO60306 1485 aaKnown RBP eCLIP24.62■■□□□ 1.536e-11■■■■■ 35.7
AUP1-205ENST00000464887 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
AUP1-205ENST00000464887 FBLN2P98095 1184 aa24.47■■□□□ 1.51
AUP1-205ENST00000464887 FOXD1Q16676 465 aa24.47■■□□□ 1.51
AUP1-205ENST00000464887 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
AUP1-205ENST00000464887 CHD1O14646 1710 aa24.42■■□□□ 1.5
AUP1-205ENST00000464887 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
AUP1-205ENST00000464887 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
AUP1-205ENST00000464887 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
AUP1-205ENST00000464887 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
AUP1-205ENST00000464887 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
AUP1-205ENST00000464887 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
AUP1-205ENST00000464887 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
AUP1-205ENST00000464887 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
AUP1-205ENST00000464887 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
AUP1-205ENST00000464887 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
AUP1-205ENST00000464887 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
AUP1-205ENST00000464887 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
AUP1-205ENST00000464887 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
AUP1-205ENST00000464887 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
AUP1-205ENST00000464887 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
AUP1-205ENST00000464887 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
AUP1-205ENST00000464887 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
AUP1-205ENST00000464887 ARHGEF11O15085 1522 aa24.2■■□□□ 1.46
AUP1-205ENST00000464887 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
AUP1-205ENST00000464887 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
AUP1-205ENST00000464887 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
AUP1-205ENST00000464887 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
AUP1-205ENST00000464887 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
AUP1-205ENST00000464887 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
AUP1-205ENST00000464887 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
AUP1-205ENST00000464887 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
AUP1-205ENST00000464887 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
AUP1-205ENST00000464887 NUP160Q12769 1436 aa23.9■■□□□ 1.42
AUP1-205ENST00000464887 IGF1RP08069 1367 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms