RNA–Protein interactions for RNA: ENST00000462300.1

AC078788.2-201, humanhuman

TSL 3 BASIC

Gene AC078788.2, Length 382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078788.2-201ENST00000462300 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
AC078788.2-201ENST00000462300 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
AC078788.2-201ENST00000462300 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
AC078788.2-201ENST00000462300 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
AC078788.2-201ENST00000462300 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
AC078788.2-201ENST00000462300 ABCC9O60706 1549 aa18.54■□□□□ 0.56
AC078788.2-201ENST00000462300 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
AC078788.2-201ENST00000462300 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
AC078788.2-201ENST00000462300 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
AC078788.2-201ENST00000462300 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
AC078788.2-201ENST00000462300 FOXD1Q16676 465 aa17.37■□□□□ 0.37
AC078788.2-201ENST00000462300 NACADO15069 1562 aa17.26■□□□□ 0.35
AC078788.2-201ENST00000462300 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC078788.2-201ENST00000462300 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
AC078788.2-201ENST00000462300 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
AC078788.2-201ENST00000462300 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
AC078788.2-201ENST00000462300 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
AC078788.2-201ENST00000462300 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
AC078788.2-201ENST00000462300 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
AC078788.2-201ENST00000462300 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
AC078788.2-201ENST00000462300 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
AC078788.2-201ENST00000462300 ADRA2BP18089 450 aa16.67■□□□□ 0.26
AC078788.2-201ENST00000462300 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
AC078788.2-201ENST00000462300 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
AC078788.2-201ENST00000462300 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
AC078788.2-201ENST00000462300 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
AC078788.2-201ENST00000462300 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
AC078788.2-201ENST00000462300 MSH5O43196 834 aa16.44■□□□□ 0.22
AC078788.2-201ENST00000462300 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
AC078788.2-201ENST00000462300 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
AC078788.2-201ENST00000462300 CUX2O14529 1486 aa16.15■□□□□ 0.18
AC078788.2-201ENST00000462300 ERCC6Q03468 1493 aa16■□□□□ 0.15
AC078788.2-201ENST00000462300 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
AC078788.2-201ENST00000462300 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
AC078788.2-201ENST00000462300 NESP48681 1621 aa15.83■□□□□ 0.13
AC078788.2-201ENST00000462300 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
AC078788.2-201ENST00000462300 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
AC078788.2-201ENST00000462300 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
AC078788.2-201ENST00000462300 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
AC078788.2-201ENST00000462300 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
AC078788.2-201ENST00000462300 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
AC078788.2-201ENST00000462300 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
AC078788.2-201ENST00000462300 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
AC078788.2-201ENST00000462300 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
AC078788.2-201ENST00000462300 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
AC078788.2-201ENST00000462300 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
AC078788.2-201ENST00000462300 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
AC078788.2-201ENST00000462300 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
AC078788.2-201ENST00000462300 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
AC078788.2-201ENST00000462300 WDR62O43379 1518 aa15.43■□□□□ 0.06
AC078788.2-201ENST00000462300 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
AC078788.2-201ENST00000462300 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
AC078788.2-201ENST00000462300 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
AC078788.2-201ENST00000462300 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
AC078788.2-201ENST00000462300 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
AC078788.2-201ENST00000462300 WIZO95785 1651 aa15.22■□□□□ 0.03
AC078788.2-201ENST00000462300 CFTRP13569 1480 aa15.21■□□□□ 0.03
AC078788.2-201ENST00000462300 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
AC078788.2-201ENST00000462300 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
AC078788.2-201ENST00000462300 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
AC078788.2-201ENST00000462300 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
AC078788.2-201ENST00000462300 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
AC078788.2-201ENST00000462300 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
AC078788.2-201ENST00000462300 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
AC078788.2-201ENST00000462300 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
AC078788.2-201ENST00000462300 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
AC078788.2-201ENST00000462300 IFT140Q96RY7 1462 aa15.02■□□□□ -0
AC078788.2-201ENST00000462300 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
AC078788.2-201ENST00000462300 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
AC078788.2-201ENST00000462300 KCNA4P22459 653 aa15□□□□□ -0.01
AC078788.2-201ENST00000462300 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
AC078788.2-201ENST00000462300 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
AC078788.2-201ENST00000462300 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
AC078788.2-201ENST00000462300 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
AC078788.2-201ENST00000462300 ARAP1Q96P48 1450 aa14.94□□□□□ -0.02
AC078788.2-201ENST00000462300 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
AC078788.2-201ENST00000462300 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
AC078788.2-201ENST00000462300 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
AC078788.2-201ENST00000462300 AQRO60306 1485 aaKnown RBP eCLIP14.88□□□□□ -0.03
AC078788.2-201ENST00000462300 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
AC078788.2-201ENST00000462300 CHD1O14646 1710 aa14.85□□□□□ -0.03
AC078788.2-201ENST00000462300 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
AC078788.2-201ENST00000462300 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
AC078788.2-201ENST00000462300 FBLN2P98095 1184 aa14.82□□□□□ -0.04
AC078788.2-201ENST00000462300 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
AC078788.2-201ENST00000462300 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
AC078788.2-201ENST00000462300 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
AC078788.2-201ENST00000462300 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
AC078788.2-201ENST00000462300 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
AC078788.2-201ENST00000462300 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
AC078788.2-201ENST00000462300 SOGA1O94964 1423 aa14.7□□□□□ -0.06
AC078788.2-201ENST00000462300 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
AC078788.2-201ENST00000462300 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
AC078788.2-201ENST00000462300 HOXD11P31277 338 aaPredicted RBP14.65□□□□□ -0.06
AC078788.2-201ENST00000462300 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
AC078788.2-201ENST00000462300 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
AC078788.2-201ENST00000462300 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
AC078788.2-201ENST00000462300 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
AC078788.2-201ENST00000462300 GRIN2BQ13224 1484 aa14.6□□□□□ -0.07
AC078788.2-201ENST00000462300 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms