RNA–Protein interactions for RNA: ENST00000461838.5

MTIF3-205, Transcript of mitochondrial translational initiation factor 3, humanhuman

TSL 3

Gene MTIF3, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTIF3-205ENST00000461838 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
MTIF3-205ENST00000461838 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
MTIF3-205ENST00000461838 ABCC9O60706 1549 aa26.6■■□□□ 1.85
MTIF3-205ENST00000461838 CCDC180Q9P1Z9 1646 aa25.94■■□□□ 1.74
MTIF3-205ENST00000461838 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
MTIF3-205ENST00000461838 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
MTIF3-205ENST00000461838 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
MTIF3-205ENST00000461838 NACADO15069 1562 aa24.67■■□□□ 1.54
MTIF3-205ENST00000461838 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
MTIF3-205ENST00000461838 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
MTIF3-205ENST00000461838 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
MTIF3-205ENST00000461838 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
MTIF3-205ENST00000461838 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
MTIF3-205ENST00000461838 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
MTIF3-205ENST00000461838 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
MTIF3-205ENST00000461838 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
MTIF3-205ENST00000461838 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
MTIF3-205ENST00000461838 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
MTIF3-205ENST00000461838 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
MTIF3-205ENST00000461838 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
MTIF3-205ENST00000461838 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
MTIF3-205ENST00000461838 CUX2O14529 1486 aa23.21■■□□□ 1.31
MTIF3-205ENST00000461838 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
MTIF3-205ENST00000461838 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
MTIF3-205ENST00000461838 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
MTIF3-205ENST00000461838 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
MTIF3-205ENST00000461838 NESP48681 1621 aa22.64■■□□□ 1.22
MTIF3-205ENST00000461838 PHF23Q9BUL5 403 aaPredicted RBP22.63■■□□□ 1.21
MTIF3-205ENST00000461838 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
MTIF3-205ENST00000461838 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
MTIF3-205ENST00000461838 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
MTIF3-205ENST00000461838 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
MTIF3-205ENST00000461838 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
MTIF3-205ENST00000461838 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
MTIF3-205ENST00000461838 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
MTIF3-205ENST00000461838 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
MTIF3-205ENST00000461838 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
MTIF3-205ENST00000461838 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
MTIF3-205ENST00000461838 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
MTIF3-205ENST00000461838 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
MTIF3-205ENST00000461838 WDR62O43379 1518 aa22.1■■□□□ 1.13
MTIF3-205ENST00000461838 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
MTIF3-205ENST00000461838 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
MTIF3-205ENST00000461838 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
MTIF3-205ENST00000461838 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
MTIF3-205ENST00000461838 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
MTIF3-205ENST00000461838 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
MTIF3-205ENST00000461838 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
MTIF3-205ENST00000461838 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
MTIF3-205ENST00000461838 WIZO95785 1651 aa21.71■■□□□ 1.07
MTIF3-205ENST00000461838 ARHGEF11O15085 1522 aa21.69■■□□□ 1.06
MTIF3-205ENST00000461838 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
MTIF3-205ENST00000461838 CFTRP13569 1480 aa21.65■■□□□ 1.06
MTIF3-205ENST00000461838 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
MTIF3-205ENST00000461838 TRHP20396 242 aaPredicted RBP21.57■■□□□ 1.04
MTIF3-205ENST00000461838 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
MTIF3-205ENST00000461838 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
MTIF3-205ENST00000461838 FOXD1Q16676 465 aa21.48■■□□□ 1.03
MTIF3-205ENST00000461838 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
MTIF3-205ENST00000461838 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
MTIF3-205ENST00000461838 CHD1O14646 1710 aa21.38■■□□□ 1.01
MTIF3-205ENST00000461838 EIF4G3O43432 1585 aaKnown RBP21.37■■□□□ 1.01
MTIF3-205ENST00000461838 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
MTIF3-205ENST00000461838 TOPBP1Q92547 1522 aa21.32■■□□□ 1
MTIF3-205ENST00000461838 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
MTIF3-205ENST00000461838 FBLN2P98095 1184 aa21.24■□□□□ 0.99
MTIF3-205ENST00000461838 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.996e-9■■■■■ 45.1
MTIF3-205ENST00000461838 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
MTIF3-205ENST00000461838 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
MTIF3-205ENST00000461838 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
MTIF3-205ENST00000461838 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
MTIF3-205ENST00000461838 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
MTIF3-205ENST00000461838 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
MTIF3-205ENST00000461838 SYNJ1O43426 1573 aa21.02■□□□□ 0.95
MTIF3-205ENST00000461838 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
MTIF3-205ENST00000461838 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
MTIF3-205ENST00000461838 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
MTIF3-205ENST00000461838 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
MTIF3-205ENST00000461838 SOGA1O94964 1423 aa20.95■□□□□ 0.94
MTIF3-205ENST00000461838 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
MTIF3-205ENST00000461838 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
MTIF3-205ENST00000461838 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
MTIF3-205ENST00000461838 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
MTIF3-205ENST00000461838 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
MTIF3-205ENST00000461838 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
MTIF3-205ENST00000461838 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
MTIF3-205ENST00000461838 PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
MTIF3-205ENST00000461838 KIF13AQ9H1H9 1805 aa20.71■□□□□ 0.91
MTIF3-205ENST00000461838 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
MTIF3-205ENST00000461838 CUX1P39880 1505 aa20.69■□□□□ 0.9
MTIF3-205ENST00000461838 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
MTIF3-205ENST00000461838 ILDR1Q86SU0 546 aaPredicted RBP20.61■□□□□ 0.89
MTIF3-205ENST00000461838 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
MTIF3-205ENST00000461838 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
MTIF3-205ENST00000461838 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
MTIF3-205ENST00000461838 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
MTIF3-205ENST00000461838 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
MTIF3-205ENST00000461838 NUP160Q12769 1436 aa20.53■□□□□ 0.88
MTIF3-205ENST00000461838 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
MTIF3-205ENST00000461838 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms