RNA–Protein interactions for RNA: ENST00000461054.1

STRIP1-203, Transcript of striatin interacting protein 1, humanhuman

TSL 3

Gene STRIP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRIP1-203ENST00000461054 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
STRIP1-203ENST00000461054 ABCC9O60706 1549 aa22.46■■□□□ 1.19
STRIP1-203ENST00000461054 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
STRIP1-203ENST00000461054 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
STRIP1-203ENST00000461054 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
STRIP1-203ENST00000461054 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
STRIP1-203ENST00000461054 NACADO15069 1562 aa20.79■□□□□ 0.92
STRIP1-203ENST00000461054 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.9
STRIP1-203ENST00000461054 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
STRIP1-203ENST00000461054 BICRAQ9NZM4 1560 aa20.52■□□□□ 0.88
STRIP1-203ENST00000461054 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
STRIP1-203ENST00000461054 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
STRIP1-203ENST00000461054 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
STRIP1-203ENST00000461054 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
STRIP1-203ENST00000461054 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
STRIP1-203ENST00000461054 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
STRIP1-203ENST00000461054 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
STRIP1-203ENST00000461054 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
STRIP1-203ENST00000461054 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
STRIP1-203ENST00000461054 CUX2O14529 1486 aa19.65■□□□□ 0.74
STRIP1-203ENST00000461054 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
STRIP1-203ENST00000461054 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
STRIP1-203ENST00000461054 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
STRIP1-203ENST00000461054 NESP48681 1621 aa19.11■□□□□ 0.65
STRIP1-203ENST00000461054 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
STRIP1-203ENST00000461054 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
STRIP1-203ENST00000461054 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
STRIP1-203ENST00000461054 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
STRIP1-203ENST00000461054 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
STRIP1-203ENST00000461054 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
STRIP1-203ENST00000461054 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
STRIP1-203ENST00000461054 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
STRIP1-203ENST00000461054 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
STRIP1-203ENST00000461054 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
STRIP1-203ENST00000461054 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
STRIP1-203ENST00000461054 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
STRIP1-203ENST00000461054 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
STRIP1-203ENST00000461054 WDR62O43379 1518 aa18.64■□□□□ 0.57
STRIP1-203ENST00000461054 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
STRIP1-203ENST00000461054 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
STRIP1-203ENST00000461054 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
STRIP1-203ENST00000461054 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
STRIP1-203ENST00000461054 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
STRIP1-203ENST00000461054 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
STRIP1-203ENST00000461054 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
STRIP1-203ENST00000461054 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
STRIP1-203ENST00000461054 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
STRIP1-203ENST00000461054 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
STRIP1-203ENST00000461054 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
STRIP1-203ENST00000461054 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
STRIP1-203ENST00000461054 CFTRP13569 1480 aa18.23■□□□□ 0.51
STRIP1-203ENST00000461054 WIZO95785 1651 aa18.22■□□□□ 0.51
STRIP1-203ENST00000461054 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
STRIP1-203ENST00000461054 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
STRIP1-203ENST00000461054 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
STRIP1-203ENST00000461054 CHD1O14646 1710 aa18.01■□□□□ 0.47
STRIP1-203ENST00000461054 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
STRIP1-203ENST00000461054 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
STRIP1-203ENST00000461054 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
STRIP1-203ENST00000461054 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
STRIP1-203ENST00000461054 FBLN2P98095 1184 aa17.92■□□□□ 0.46
STRIP1-203ENST00000461054 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
STRIP1-203ENST00000461054 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.461e-6■■■■□ 24.7
STRIP1-203ENST00000461054 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
STRIP1-203ENST00000461054 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
STRIP1-203ENST00000461054 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
STRIP1-203ENST00000461054 CLASP1Q7Z460 1538 aa17.78■□□□□ 0.44
STRIP1-203ENST00000461054 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
STRIP1-203ENST00000461054 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
STRIP1-203ENST00000461054 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
STRIP1-203ENST00000461054 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
STRIP1-203ENST00000461054 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
STRIP1-203ENST00000461054 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
STRIP1-203ENST00000461054 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
STRIP1-203ENST00000461054 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
STRIP1-203ENST00000461054 SOGA1O94964 1423 aa17.64■□□□□ 0.41
STRIP1-203ENST00000461054 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
STRIP1-203ENST00000461054 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
STRIP1-203ENST00000461054 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
STRIP1-203ENST00000461054 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
STRIP1-203ENST00000461054 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
STRIP1-203ENST00000461054 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
STRIP1-203ENST00000461054 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
STRIP1-203ENST00000461054 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
STRIP1-203ENST00000461054 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
STRIP1-203ENST00000461054 CUX1P39880 1505 aa17.39■□□□□ 0.37
STRIP1-203ENST00000461054 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
STRIP1-203ENST00000461054 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
STRIP1-203ENST00000461054 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
STRIP1-203ENST00000461054 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
STRIP1-203ENST00000461054 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
STRIP1-203ENST00000461054 NUP160Q12769 1436 aa17.3■□□□□ 0.36
STRIP1-203ENST00000461054 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
STRIP1-203ENST00000461054 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.36
STRIP1-203ENST00000461054 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
STRIP1-203ENST00000461054 KDM6BO15054 1643 aa17.22■□□□□ 0.35
STRIP1-203ENST00000461054 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
STRIP1-203ENST00000461054 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
STRIP1-203ENST00000461054 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
STRIP1-203ENST00000461054 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms