RNA–Protein interactions for RNA: ENST00000460806.1

BHLHE40-202, Transcript of basic helix-loop-helix family member e40, humanhuman

TSL 2

Gene BHLHE40, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-202ENST00000460806 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
BHLHE40-202ENST00000460806 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
BHLHE40-202ENST00000460806 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
BHLHE40-202ENST00000460806 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
BHLHE40-202ENST00000460806 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
BHLHE40-202ENST00000460806 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
BHLHE40-202ENST00000460806 ABCC9O60706 1549 aa14.49□□□□□ -0.09
BHLHE40-202ENST00000460806 FOXD1Q16676 465 aa14.05□□□□□ -0.16
BHLHE40-202ENST00000460806 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
BHLHE40-202ENST00000460806 NACADO15069 1562 aa13.98□□□□□ -0.17
BHLHE40-202ENST00000460806 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
BHLHE40-202ENST00000460806 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
BHLHE40-202ENST00000460806 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
BHLHE40-202ENST00000460806 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
BHLHE40-202ENST00000460806 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
BHLHE40-202ENST00000460806 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
BHLHE40-202ENST00000460806 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
BHLHE40-202ENST00000460806 BICRAQ9NZM4 1560 aa13.58□□□□□ -0.24
BHLHE40-202ENST00000460806 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
BHLHE40-202ENST00000460806 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
BHLHE40-202ENST00000460806 MSH5O43196 834 aa13.38□□□□□ -0.27
BHLHE40-202ENST00000460806 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
BHLHE40-202ENST00000460806 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
BHLHE40-202ENST00000460806 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
BHLHE40-202ENST00000460806 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
BHLHE40-202ENST00000460806 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
BHLHE40-202ENST00000460806 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
BHLHE40-202ENST00000460806 BAZ1AQ9NRL2 1556 aaPredicted RBP13.02□□□□□ -0.33
BHLHE40-202ENST00000460806 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
BHLHE40-202ENST00000460806 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
BHLHE40-202ENST00000460806 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
BHLHE40-202ENST00000460806 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
BHLHE40-202ENST00000460806 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.35
BHLHE40-202ENST00000460806 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
BHLHE40-202ENST00000460806 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
BHLHE40-202ENST00000460806 WIZO95785 1651 aa12.84□□□□□ -0.35
BHLHE40-202ENST00000460806 RSF1Q96T23 1441 aaPredicted RBP12.83□□□□□ -0.36
BHLHE40-202ENST00000460806 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
BHLHE40-202ENST00000460806 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
BHLHE40-202ENST00000460806 ADRA2BP18089 450 aa12.75□□□□□ -0.37
BHLHE40-202ENST00000460806 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
BHLHE40-202ENST00000460806 NESP48681 1621 aa12.57□□□□□ -0.4
BHLHE40-202ENST00000460806 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
BHLHE40-202ENST00000460806 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
BHLHE40-202ENST00000460806 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
BHLHE40-202ENST00000460806 CADPSQ9ULU8 1353 aa12.52□□□□□ -0.41
BHLHE40-202ENST00000460806 CFTRP13569 1480 aa12.46□□□□□ -0.41
BHLHE40-202ENST00000460806 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
BHLHE40-202ENST00000460806 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
BHLHE40-202ENST00000460806 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
BHLHE40-202ENST00000460806 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
BHLHE40-202ENST00000460806 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
BHLHE40-202ENST00000460806 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
BHLHE40-202ENST00000460806 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
BHLHE40-202ENST00000460806 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
BHLHE40-202ENST00000460806 CUX2O14529 1486 aa12.3□□□□□ -0.44
BHLHE40-202ENST00000460806 WDR62O43379 1518 aa12.29□□□□□ -0.44
BHLHE40-202ENST00000460806 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
BHLHE40-202ENST00000460806 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.46
BHLHE40-202ENST00000460806 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
BHLHE40-202ENST00000460806 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
BHLHE40-202ENST00000460806 CUX1P39880 1505 aa12.16□□□□□ -0.46
BHLHE40-202ENST00000460806 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
BHLHE40-202ENST00000460806 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
BHLHE40-202ENST00000460806 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
BHLHE40-202ENST00000460806 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
BHLHE40-202ENST00000460806 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
BHLHE40-202ENST00000460806 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
BHLHE40-202ENST00000460806 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
BHLHE40-202ENST00000460806 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
BHLHE40-202ENST00000460806 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
BHLHE40-202ENST00000460806 ZNF608Q9ULD9 1512 aaPredicted RBP12.05□□□□□ -0.48
BHLHE40-202ENST00000460806 SOGA1O94964 1423 aa12.04□□□□□ -0.48
BHLHE40-202ENST00000460806 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
BHLHE40-202ENST00000460806 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
BHLHE40-202ENST00000460806 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
BHLHE40-202ENST00000460806 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.491e-16■■■■□ 21.2
BHLHE40-202ENST00000460806 TDRD9Q8NDG6 1382 aaKnown RBP11.96□□□□□ -0.49
BHLHE40-202ENST00000460806 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
BHLHE40-202ENST00000460806 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
BHLHE40-202ENST00000460806 GAPVD1Q14C86 1478 aa11.91□□□□□ -0.5
BHLHE40-202ENST00000460806 DMRT2Q9Y5R5 561 aa11.9□□□□□ -0.5
BHLHE40-202ENST00000460806 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
BHLHE40-202ENST00000460806 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
BHLHE40-202ENST00000460806 CHD1O14646 1710 aa11.86□□□□□ -0.51
BHLHE40-202ENST00000460806 MAGI1Q96QZ7 1491 aaPredicted RBP11.86□□□□□ -0.51
BHLHE40-202ENST00000460806 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
BHLHE40-202ENST00000460806 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
BHLHE40-202ENST00000460806 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
BHLHE40-202ENST00000460806 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
BHLHE40-202ENST00000460806 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
BHLHE40-202ENST00000460806 SYNJ2O15056 1496 aa11.81□□□□□ -0.52
BHLHE40-202ENST00000460806 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
BHLHE40-202ENST00000460806 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
BHLHE40-202ENST00000460806 FBLN2P98095 1184 aa11.79□□□□□ -0.52
BHLHE40-202ENST00000460806 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
BHLHE40-202ENST00000460806 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
BHLHE40-202ENST00000460806 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.52
BHLHE40-202ENST00000460806 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.52
BHLHE40-202ENST00000460806 IGF1RP08069 1367 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms