RNA–Protein interactions for RNA: ENST00000460659.5

RERE-205, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-205ENST00000460659 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
RERE-205ENST00000460659 ABCC9O60706 1549 aa24.71■■□□□ 1.55
RERE-205ENST00000460659 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
RERE-205ENST00000460659 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
RERE-205ENST00000460659 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
RERE-205ENST00000460659 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
RERE-205ENST00000460659 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
RERE-205ENST00000460659 NACADO15069 1562 aa22.85■■□□□ 1.25
RERE-205ENST00000460659 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
RERE-205ENST00000460659 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
RERE-205ENST00000460659 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
RERE-205ENST00000460659 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
RERE-205ENST00000460659 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
RERE-205ENST00000460659 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
RERE-205ENST00000460659 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
RERE-205ENST00000460659 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
RERE-205ENST00000460659 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
RERE-205ENST00000460659 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
RERE-205ENST00000460659 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
RERE-205ENST00000460659 CUX2O14529 1486 aa21.39■■□□□ 1.01
RERE-205ENST00000460659 ERCC6Q03468 1493 aa21.32■■□□□ 1
RERE-205ENST00000460659 NESP48681 1621 aa21.11■□□□□ 0.97
RERE-205ENST00000460659 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
RERE-205ENST00000460659 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
RERE-205ENST00000460659 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
RERE-205ENST00000460659 TRIM41Q8WV44 630 aa20.93■□□□□ 0.94
RERE-205ENST00000460659 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
RERE-205ENST00000460659 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
RERE-205ENST00000460659 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
RERE-205ENST00000460659 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
RERE-205ENST00000460659 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
RERE-205ENST00000460659 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
RERE-205ENST00000460659 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
RERE-205ENST00000460659 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
RERE-205ENST00000460659 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
RERE-205ENST00000460659 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
RERE-205ENST00000460659 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
RERE-205ENST00000460659 WDR62O43379 1518 aa20.5■□□□□ 0.87
RERE-205ENST00000460659 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
RERE-205ENST00000460659 WIZO95785 1651 aa20.35■□□□□ 0.85
RERE-205ENST00000460659 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
RERE-205ENST00000460659 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
RERE-205ENST00000460659 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
RERE-205ENST00000460659 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
RERE-205ENST00000460659 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
RERE-205ENST00000460659 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
RERE-205ENST00000460659 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
RERE-205ENST00000460659 CFTRP13569 1480 aa20.1■□□□□ 0.81
RERE-205ENST00000460659 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
RERE-205ENST00000460659 ZNF608Q9ULD9 1512 aaPredicted RBP20.04■□□□□ 0.8
RERE-205ENST00000460659 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
RERE-205ENST00000460659 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
RERE-205ENST00000460659 CHD1O14646 1710 aa19.94■□□□□ 0.78
RERE-205ENST00000460659 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
RERE-205ENST00000460659 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
RERE-205ENST00000460659 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
RERE-205ENST00000460659 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
RERE-205ENST00000460659 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
RERE-205ENST00000460659 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
RERE-205ENST00000460659 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
RERE-205ENST00000460659 AQRO60306 1485 aaKnown RBP eCLIP19.76■□□□□ 0.75
RERE-205ENST00000460659 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
RERE-205ENST00000460659 FBLN2P98095 1184 aa19.73■□□□□ 0.75
RERE-205ENST00000460659 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
RERE-205ENST00000460659 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
RERE-205ENST00000460659 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
RERE-205ENST00000460659 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
RERE-205ENST00000460659 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
RERE-205ENST00000460659 CLASP1Q7Z460 1538 aa19.59■□□□□ 0.73
RERE-205ENST00000460659 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
RERE-205ENST00000460659 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
RERE-205ENST00000460659 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
RERE-205ENST00000460659 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
RERE-205ENST00000460659 SOGA1O94964 1423 aa19.45■□□□□ 0.7
RERE-205ENST00000460659 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
RERE-205ENST00000460659 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
RERE-205ENST00000460659 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
RERE-205ENST00000460659 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
RERE-205ENST00000460659 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
RERE-205ENST00000460659 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
RERE-205ENST00000460659 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
RERE-205ENST00000460659 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
RERE-205ENST00000460659 ERCC6L2Q5T890 1561 aa19.34■□□□□ 0.69
RERE-205ENST00000460659 CUX1P39880 1505 aa19.33■□□□□ 0.68
RERE-205ENST00000460659 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
RERE-205ENST00000460659 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
RERE-205ENST00000460659 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
RERE-205ENST00000460659 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
RERE-205ENST00000460659 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
RERE-205ENST00000460659 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
RERE-205ENST00000460659 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
RERE-205ENST00000460659 NUP160Q12769 1436 aa19.04■□□□□ 0.64
RERE-205ENST00000460659 TSPOAP1O95153 1857 aa18.96■□□□□ 0.63
RERE-205ENST00000460659 DIP2BQ9P265 1576 aa18.94■□□□□ 0.62
RERE-205ENST00000460659 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
RERE-205ENST00000460659 FAM69CQ0P6D2 419 aa18.93■□□□□ 0.62
RERE-205ENST00000460659 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
RERE-205ENST00000460659 KDM6BO15054 1643 aa18.92■□□□□ 0.62
RERE-205ENST00000460659 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
RERE-205ENST00000460659 KDM4FA0A1W2PPD8 638 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms