RNA–Protein interactions for RNA: ENST00000456397.6

TM2D2-202, Transcript of TM2 domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM2D2, Length 3,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D2-202ENST00000456397 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
TM2D2-202ENST00000456397 HRCP23327 699 aa19.56■□□□□ 0.72
TM2D2-202ENST00000456397 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
TM2D2-202ENST00000456397 PELP1Q8IZL8 1130 aaKnown RBP19.06■□□□□ 0.64
TM2D2-202ENST00000456397 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
TM2D2-202ENST00000456397 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
TM2D2-202ENST00000456397 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
TM2D2-202ENST00000456397 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
TM2D2-202ENST00000456397 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
TM2D2-202ENST00000456397 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
TM2D2-202ENST00000456397 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
TM2D2-202ENST00000456397 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
TM2D2-202ENST00000456397 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
TM2D2-202ENST00000456397 MYT1Q01538 1121 aa18.33■□□□□ 0.52
TM2D2-202ENST00000456397 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
TM2D2-202ENST00000456397 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
TM2D2-202ENST00000456397 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
TM2D2-202ENST00000456397 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
TM2D2-202ENST00000456397 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
TM2D2-202ENST00000456397 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
TM2D2-202ENST00000456397 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
TM2D2-202ENST00000456397 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
TM2D2-202ENST00000456397 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
TM2D2-202ENST00000456397 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.41
TM2D2-202ENST00000456397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
TM2D2-202ENST00000456397 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
TM2D2-202ENST00000456397 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
TM2D2-202ENST00000456397 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
TM2D2-202ENST00000456397 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
TM2D2-202ENST00000456397 ABCC9O60706 1549 aa17.3■□□□□ 0.36
TM2D2-202ENST00000456397 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
TM2D2-202ENST00000456397 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
TM2D2-202ENST00000456397 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
TM2D2-202ENST00000456397 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
TM2D2-202ENST00000456397 MIER1Q8N108 512 aa17.19■□□□□ 0.34
TM2D2-202ENST00000456397 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
TM2D2-202ENST00000456397 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
TM2D2-202ENST00000456397 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
TM2D2-202ENST00000456397 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
TM2D2-202ENST00000456397 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
TM2D2-202ENST00000456397 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
TM2D2-202ENST00000456397 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
TM2D2-202ENST00000456397 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
TM2D2-202ENST00000456397 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
TM2D2-202ENST00000456397 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
TM2D2-202ENST00000456397 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
TM2D2-202ENST00000456397 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
TM2D2-202ENST00000456397 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
TM2D2-202ENST00000456397 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
TM2D2-202ENST00000456397 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
TM2D2-202ENST00000456397 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
TM2D2-202ENST00000456397 BCANQ96GW7 911 aa16.62■□□□□ 0.25
TM2D2-202ENST00000456397 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
TM2D2-202ENST00000456397 WIZO95785 1651 aa16.61■□□□□ 0.25
TM2D2-202ENST00000456397 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
TM2D2-202ENST00000456397 RBM19Q9Y4C8 960 aaKnown RBP16.58■□□□□ 0.25
TM2D2-202ENST00000456397 SOGA1O94964 1423 aa16.55■□□□□ 0.24
TM2D2-202ENST00000456397 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
TM2D2-202ENST00000456397 MSH5O43196 834 aa16.52■□□□□ 0.23
TM2D2-202ENST00000456397 FKBP8Q14318 412 aa16.5■□□□□ 0.23
TM2D2-202ENST00000456397 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
TM2D2-202ENST00000456397 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
TM2D2-202ENST00000456397 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
TM2D2-202ENST00000456397 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
TM2D2-202ENST00000456397 NACADO15069 1562 aa16.43■□□□□ 0.22
TM2D2-202ENST00000456397 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
TM2D2-202ENST00000456397 APLP2Q06481 763 aa16.4■□□□□ 0.22
TM2D2-202ENST00000456397 ITGAEP38570 1179 aa16.39■□□□□ 0.21
TM2D2-202ENST00000456397 EEA1Q15075 1411 aa16.38■□□□□ 0.21
TM2D2-202ENST00000456397 CLIP1P30622 1438 aa16.33■□□□□ 0.21
TM2D2-202ENST00000456397 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
TM2D2-202ENST00000456397 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
TM2D2-202ENST00000456397 NEFLP07196 543 aa16.27■□□□□ 0.2
TM2D2-202ENST00000456397 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
TM2D2-202ENST00000456397 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
TM2D2-202ENST00000456397 KIF21BO75037 1637 aa16.23■□□□□ 0.19
TM2D2-202ENST00000456397 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
TM2D2-202ENST00000456397 DEKP35659 375 aaKnown RBP16.21■□□□□ 0.19
TM2D2-202ENST00000456397 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
TM2D2-202ENST00000456397 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
TM2D2-202ENST00000456397 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
TM2D2-202ENST00000456397 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
TM2D2-202ENST00000456397 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
TM2D2-202ENST00000456397 CUX2O14529 1486 aa16.12■□□□□ 0.17
TM2D2-202ENST00000456397 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
TM2D2-202ENST00000456397 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
TM2D2-202ENST00000456397 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
TM2D2-202ENST00000456397 RAPGEF2Q9Y4G8 1499 aa16.09■□□□□ 0.17
TM2D2-202ENST00000456397 PPP1R15AO75807 674 aaPredicted RBP16.09■□□□□ 0.17
TM2D2-202ENST00000456397 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
TM2D2-202ENST00000456397 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
TM2D2-202ENST00000456397 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
TM2D2-202ENST00000456397 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
TM2D2-202ENST00000456397 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
TM2D2-202ENST00000456397 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
TM2D2-202ENST00000456397 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
TM2D2-202ENST00000456397 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
TM2D2-202ENST00000456397 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
TM2D2-202ENST00000456397 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
TM2D2-202ENST00000456397 NBR1Q14596 966 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms