RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
LDHBP1-201ENST00000455730 ABCC9O60706 1549 aa33.28■■■□□ 2.92
LDHBP1-201ENST00000455730 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
LDHBP1-201ENST00000455730 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
LDHBP1-201ENST00000455730 RB1CC1Q8TDY2 1594 aa31.29■■■□□ 2.6
LDHBP1-201ENST00000455730 NACADO15069 1562 aa30.88■■■□□ 2.53
LDHBP1-201ENST00000455730 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
LDHBP1-201ENST00000455730 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
LDHBP1-201ENST00000455730 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
LDHBP1-201ENST00000455730 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
LDHBP1-201ENST00000455730 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
LDHBP1-201ENST00000455730 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
LDHBP1-201ENST00000455730 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
LDHBP1-201ENST00000455730 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
LDHBP1-201ENST00000455730 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.38
LDHBP1-201ENST00000455730 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
LDHBP1-201ENST00000455730 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
LDHBP1-201ENST00000455730 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
LDHBP1-201ENST00000455730 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
LDHBP1-201ENST00000455730 CUX2O14529 1486 aa28.98■■■□□ 2.23
LDHBP1-201ENST00000455730 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
LDHBP1-201ENST00000455730 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
LDHBP1-201ENST00000455730 NESP48681 1621 aa28.36■■■□□ 2.13
LDHBP1-201ENST00000455730 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
LDHBP1-201ENST00000455730 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
LDHBP1-201ENST00000455730 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
LDHBP1-201ENST00000455730 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
LDHBP1-201ENST00000455730 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
LDHBP1-201ENST00000455730 SMARCA4P51532 1647 aa28.09■■■□□ 2.09
LDHBP1-201ENST00000455730 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
LDHBP1-201ENST00000455730 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
LDHBP1-201ENST00000455730 KIF21AQ7Z4S6 1674 aa27.96■■■□□ 2.07
LDHBP1-201ENST00000455730 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
LDHBP1-201ENST00000455730 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
LDHBP1-201ENST00000455730 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
LDHBP1-201ENST00000455730 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
LDHBP1-201ENST00000455730 WDR62O43379 1518 aa27.65■■■□□ 2.02
LDHBP1-201ENST00000455730 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
LDHBP1-201ENST00000455730 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
LDHBP1-201ENST00000455730 OSCARQ8IYS5 282 aa27.53■■■□□ 2
LDHBP1-201ENST00000455730 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
LDHBP1-201ENST00000455730 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
LDHBP1-201ENST00000455730 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
LDHBP1-201ENST00000455730 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
LDHBP1-201ENST00000455730 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
LDHBP1-201ENST00000455730 WIZO95785 1651 aa27.21■■□□□ 1.95
LDHBP1-201ENST00000455730 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
LDHBP1-201ENST00000455730 CFTRP13569 1480 aa27.13■■□□□ 1.93
LDHBP1-201ENST00000455730 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
LDHBP1-201ENST00000455730 CYB5RLQ6IPT4 315 aa26.96■■□□□ 1.91
LDHBP1-201ENST00000455730 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.91
LDHBP1-201ENST00000455730 TRHP20396 242 aaPredicted RBP26.93■■□□□ 1.9
LDHBP1-201ENST00000455730 IFT140Q96RY7 1462 aa26.89■■□□□ 1.9
LDHBP1-201ENST00000455730 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
LDHBP1-201ENST00000455730 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
LDHBP1-201ENST00000455730 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
LDHBP1-201ENST00000455730 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
LDHBP1-201ENST00000455730 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
LDHBP1-201ENST00000455730 CHD1O14646 1710 aa26.72■■□□□ 1.87
LDHBP1-201ENST00000455730 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
LDHBP1-201ENST00000455730 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
LDHBP1-201ENST00000455730 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.85
LDHBP1-201ENST00000455730 FBLN2P98095 1184 aa26.59■■□□□ 1.85
LDHBP1-201ENST00000455730 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
LDHBP1-201ENST00000455730 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
LDHBP1-201ENST00000455730 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
LDHBP1-201ENST00000455730 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
LDHBP1-201ENST00000455730 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.81
LDHBP1-201ENST00000455730 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
LDHBP1-201ENST00000455730 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
LDHBP1-201ENST00000455730 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
LDHBP1-201ENST00000455730 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
LDHBP1-201ENST00000455730 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
LDHBP1-201ENST00000455730 CHMP7Q8WUX9 453 aaPredicted RBP26.25■■□□□ 1.79
LDHBP1-201ENST00000455730 SOGA1O94964 1423 aa26.23■■□□□ 1.79
LDHBP1-201ENST00000455730 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
LDHBP1-201ENST00000455730 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
LDHBP1-201ENST00000455730 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
LDHBP1-201ENST00000455730 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
LDHBP1-201ENST00000455730 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
LDHBP1-201ENST00000455730 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
LDHBP1-201ENST00000455730 CUX1P39880 1505 aa25.96■■□□□ 1.75
LDHBP1-201ENST00000455730 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
LDHBP1-201ENST00000455730 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
LDHBP1-201ENST00000455730 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
LDHBP1-201ENST00000455730 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
LDHBP1-201ENST00000455730 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
LDHBP1-201ENST00000455730 GRIN2AQ12879 1464 aa25.78■■□□□ 1.72
LDHBP1-201ENST00000455730 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
LDHBP1-201ENST00000455730 NUP160Q12769 1436 aa25.72■■□□□ 1.71
LDHBP1-201ENST00000455730 SHROOM2Q13796 1616 aa25.7■■□□□ 1.7
LDHBP1-201ENST00000455730 ILDR1Q86SU0 546 aaPredicted RBP25.68■■□□□ 1.7
LDHBP1-201ENST00000455730 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
LDHBP1-201ENST00000455730 KDM4FA0A1W2PPD8 638 aa25.61■■□□□ 1.69
LDHBP1-201ENST00000455730 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
LDHBP1-201ENST00000455730 ABCC10Q5T3U5 1492 aa25.57■■□□□ 1.68
LDHBP1-201ENST00000455730 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
LDHBP1-201ENST00000455730 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
LDHBP1-201ENST00000455730 DIP2BQ9P265 1576 aa25.49■■□□□ 1.67
LDHBP1-201ENST00000455730 KDM6BO15054 1643 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms