RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 NISCHQ9Y2I1 1504 aa40.02■■■■■ 4
NELFE-207ENST00000454913 ABCC9O60706 1549 aa37.08■■■■□ 3.53
NELFE-207ENST00000454913 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
NELFE-207ENST00000454913 DNAJC5BQ9UF47 199 aa35.38■■■■□ 3.25
NELFE-207ENST00000454913 RB1CC1Q8TDY2 1594 aa34.94■■■■□ 3.18
NELFE-207ENST00000454913 NACADO15069 1562 aa34.48■■■■□ 3.11
NELFE-207ENST00000454913 PABPN1Q86U42 306 aaKnown RBP eCLIP34.38■■■■□ 3.09
NELFE-207ENST00000454913 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
NELFE-207ENST00000454913 UNC13AQ9UPW8 1703 aa34.19■■■■□ 3.06
NELFE-207ENST00000454913 BICRAQ9NZM4 1560 aa33.9■■■■□ 3.02
NELFE-207ENST00000454913 MYO15BQ96JP2 1530 aa33.67■■■□□ 2.98
NELFE-207ENST00000454913 CECR2Q9BXF3 1484 aa33.46■■■□□ 2.95
NELFE-207ENST00000454913 CC2D2AQ9P2K1 1620 aa33.45■■■□□ 2.95
NELFE-207ENST00000454913 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
NELFE-207ENST00000454913 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
NELFE-207ENST00000454913 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
NELFE-207ENST00000454913 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
NELFE-207ENST00000454913 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
NELFE-207ENST00000454913 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
NELFE-207ENST00000454913 CUX2O14529 1486 aa32.23■■■□□ 2.75
NELFE-207ENST00000454913 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
NELFE-207ENST00000454913 NCAPD3P42695 1498 aa31.79■■■□□ 2.68
NELFE-207ENST00000454913 NESP48681 1621 aa31.61■■■□□ 2.65
NELFE-207ENST00000454913 ATAD2BQ9ULI0 1458 aa31.61■■■□□ 2.65
NELFE-207ENST00000454913 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
NELFE-207ENST00000454913 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
NELFE-207ENST00000454913 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
NELFE-207ENST00000454913 SMARCA4P51532 1647 aa31.43■■■□□ 2.62
NELFE-207ENST00000454913 TRIM41Q8WV44 630 aa31.42■■■□□ 2.62
NELFE-207ENST00000454913 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
NELFE-207ENST00000454913 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
NELFE-207ENST00000454913 KIF21AQ7Z4S6 1674 aa31.24■■■□□ 2.59
NELFE-207ENST00000454913 BAZ1AQ9NRL2 1556 aaPredicted RBP31.15■■■□□ 2.58
NELFE-207ENST00000454913 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
NELFE-207ENST00000454913 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
NELFE-207ENST00000454913 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.53
NELFE-207ENST00000454913 MROH2BQ7Z745 1585 aa30.85■■■□□ 2.53
NELFE-207ENST00000454913 WDR62O43379 1518 aa30.83■■■□□ 2.53
NELFE-207ENST00000454913 CADPSQ9ULU8 1353 aa30.81■■■□□ 2.52
NELFE-207ENST00000454913 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
NELFE-207ENST00000454913 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
NELFE-207ENST00000454913 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
NELFE-207ENST00000454913 WIZO95785 1651 aa30.49■■■□□ 2.47
NELFE-207ENST00000454913 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
NELFE-207ENST00000454913 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
NELFE-207ENST00000454913 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
NELFE-207ENST00000454913 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
NELFE-207ENST00000454913 CFTRP13569 1480 aa30.29■■■□□ 2.44
NELFE-207ENST00000454913 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
NELFE-207ENST00000454913 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
NELFE-207ENST00000454913 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
NELFE-207ENST00000454913 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
NELFE-207ENST00000454913 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
NELFE-207ENST00000454913 IFT140Q96RY7 1462 aa30.01■■■□□ 2.4
NELFE-207ENST00000454913 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
NELFE-207ENST00000454913 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
NELFE-207ENST00000454913 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
NELFE-207ENST00000454913 CHD1O14646 1710 aa29.85■■■□□ 2.37
NELFE-207ENST00000454913 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
NELFE-207ENST00000454913 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
NELFE-207ENST00000454913 FBLN2P98095 1184 aa29.73■■■□□ 2.35
NELFE-207ENST00000454913 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
NELFE-207ENST00000454913 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
NELFE-207ENST00000454913 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.348e-7■■■□□ 14.6
NELFE-207ENST00000454913 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
NELFE-207ENST00000454913 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
NELFE-207ENST00000454913 TARBP1Q13395 1621 aaKnown RBP29.63■■■□□ 2.33
NELFE-207ENST00000454913 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
NELFE-207ENST00000454913 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
NELFE-207ENST00000454913 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
NELFE-207ENST00000454913 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
NELFE-207ENST00000454913 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
NELFE-207ENST00000454913 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
NELFE-207ENST00000454913 SOGA1O94964 1423 aa29.34■■■□□ 2.29
NELFE-207ENST00000454913 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
NELFE-207ENST00000454913 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
NELFE-207ENST00000454913 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
NELFE-207ENST00000454913 FGD5Q6ZNL6 1462 aa29.2■■■□□ 2.26
NELFE-207ENST00000454913 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
NELFE-207ENST00000454913 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
NELFE-207ENST00000454913 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
NELFE-207ENST00000454913 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
NELFE-207ENST00000454913 CUX1P39880 1505 aa29.03■■■□□ 2.24
NELFE-207ENST00000454913 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
NELFE-207ENST00000454913 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
NELFE-207ENST00000454913 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
NELFE-207ENST00000454913 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
NELFE-207ENST00000454913 KIF13AQ9H1H9 1805 aa28.79■■■□□ 2.2
NELFE-207ENST00000454913 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
NELFE-207ENST00000454913 ADAMTS12P58397 1594 aa28.7■■■□□ 2.18
NELFE-207ENST00000454913 NUP160Q12769 1436 aa28.69■■■□□ 2.18
NELFE-207ENST00000454913 SHROOM2Q13796 1616 aa28.68■■■□□ 2.18
NELFE-207ENST00000454913 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
NELFE-207ENST00000454913 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
NELFE-207ENST00000454913 FAM69CQ0P6D2 419 aa28.53■■■□□ 2.16
NELFE-207ENST00000454913 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
NELFE-207ENST00000454913 ABCC10Q5T3U5 1492 aa28.48■■■□□ 2.15
NELFE-207ENST00000454913 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
NELFE-207ENST00000454913 KDM6BO15054 1643 aa28.43■■■□□ 2.14
NELFE-207ENST00000454913 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms