RNA–Protein interactions for RNA: ENST00000453395.5

LINC01297-202, Transcript of long intergenic non-protein coding RNA 1297, humanhuman

TSL 5 BASIC

Gene LINC01297, Length 624 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01297-202ENST00000453395 AEBP2Q6ZN18 517 aaPredicted RBP33.49■■■□□ 2.95
LINC01297-202ENST00000453395 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
LINC01297-202ENST00000453395 NISCHQ9Y2I1 1504 aa30.14■■■□□ 2.42
LINC01297-202ENST00000453395 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
LINC01297-202ENST00000453395 PHF23Q9BUL5 403 aaPredicted RBP28.45■■■□□ 2.14
LINC01297-202ENST00000453395 CCDC180Q9P1Z9 1646 aa27.04■■□□□ 1.92
LINC01297-202ENST00000453395 ABCC9O60706 1549 aa26.95■■□□□ 1.9
LINC01297-202ENST00000453395 FOXD1Q16676 465 aa26.46■■□□□ 1.83
LINC01297-202ENST00000453395 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
LINC01297-202ENST00000453395 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
LINC01297-202ENST00000453395 NACADO15069 1562 aa25.52■■□□□ 1.68
LINC01297-202ENST00000453395 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
LINC01297-202ENST00000453395 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
LINC01297-202ENST00000453395 ADRA2BP18089 450 aa25.2■■□□□ 1.62
LINC01297-202ENST00000453395 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
LINC01297-202ENST00000453395 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
LINC01297-202ENST00000453395 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
LINC01297-202ENST00000453395 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
LINC01297-202ENST00000453395 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
LINC01297-202ENST00000453395 PIAS4Q8N2W9 510 aaPredicted RBP24.91■■□□□ 1.58
LINC01297-202ENST00000453395 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
LINC01297-202ENST00000453395 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
LINC01297-202ENST00000453395 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
LINC01297-202ENST00000453395 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
LINC01297-202ENST00000453395 MSH5O43196 834 aa24.52■■□□□ 1.52
LINC01297-202ENST00000453395 CC2D2AQ9P2K1 1620 aa24.33■■□□□ 1.49
LINC01297-202ENST00000453395 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
LINC01297-202ENST00000453395 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
LINC01297-202ENST00000453395 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
LINC01297-202ENST00000453395 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
LINC01297-202ENST00000453395 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
LINC01297-202ENST00000453395 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
LINC01297-202ENST00000453395 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
LINC01297-202ENST00000453395 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
LINC01297-202ENST00000453395 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
LINC01297-202ENST00000453395 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
LINC01297-202ENST00000453395 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
LINC01297-202ENST00000453395 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
LINC01297-202ENST00000453395 CUX2O14529 1486 aa23.18■■□□□ 1.3
LINC01297-202ENST00000453395 NESP48681 1621 aa23.15■■□□□ 1.3
LINC01297-202ENST00000453395 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
LINC01297-202ENST00000453395 PPP4R3CPQ6ZMV5 832 aa23.03■■□□□ 1.28
LINC01297-202ENST00000453395 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
LINC01297-202ENST00000453395 MAPK8IP2Q13387 824 aaPredicted RBP22.97■■□□□ 1.27
LINC01297-202ENST00000453395 WIZO95785 1651 aa22.96■■□□□ 1.27
LINC01297-202ENST00000453395 DNAJC5Q9H3Z4 198 aa22.95■■□□□ 1.26
LINC01297-202ENST00000453395 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
LINC01297-202ENST00000453395 POTEDQ86YR6 584 aa22.91■■□□□ 1.26
LINC01297-202ENST00000453395 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
LINC01297-202ENST00000453395 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
LINC01297-202ENST00000453395 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
LINC01297-202ENST00000453395 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
LINC01297-202ENST00000453395 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
LINC01297-202ENST00000453395 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
LINC01297-202ENST00000453395 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
LINC01297-202ENST00000453395 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
LINC01297-202ENST00000453395 WDR62O43379 1518 aa22.64■■□□□ 1.21
LINC01297-202ENST00000453395 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
LINC01297-202ENST00000453395 CFTRP13569 1480 aa22.6■■□□□ 1.21
LINC01297-202ENST00000453395 CNKSR2Q8WXI2 1034 aa22.44■■□□□ 1.18
LINC01297-202ENST00000453395 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
LINC01297-202ENST00000453395 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
LINC01297-202ENST00000453395 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
LINC01297-202ENST00000453395 NCBP3Q53F19 620 aaKnown RBP22.33■■□□□ 1.17
LINC01297-202ENST00000453395 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
LINC01297-202ENST00000453395 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
LINC01297-202ENST00000453395 KCNA4P22459 653 aa22.14■■□□□ 1.13
LINC01297-202ENST00000453395 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
LINC01297-202ENST00000453395 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
LINC01297-202ENST00000453395 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
LINC01297-202ENST00000453395 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
LINC01297-202ENST00000453395 RNF216Q9NWF9 866 aaPredicted RBP22.07■■□□□ 1.12
LINC01297-202ENST00000453395 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
LINC01297-202ENST00000453395 HOXD11P31277 338 aaPredicted RBP22.05■■□□□ 1.12
LINC01297-202ENST00000453395 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
LINC01297-202ENST00000453395 NPM3O75607 178 aaKnown RBP22■■□□□ 1.11
LINC01297-202ENST00000453395 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
LINC01297-202ENST00000453395 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
LINC01297-202ENST00000453395 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC01297-202ENST00000453395 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
LINC01297-202ENST00000453395 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
LINC01297-202ENST00000453395 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
LINC01297-202ENST00000453395 CUX1P39880 1505 aa21.84■■□□□ 1.09
LINC01297-202ENST00000453395 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
LINC01297-202ENST00000453395 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
LINC01297-202ENST00000453395 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
LINC01297-202ENST00000453395 SOGA1O94964 1423 aa21.83■■□□□ 1.09
LINC01297-202ENST00000453395 CHD1O14646 1710 aa21.82■■□□□ 1.08
LINC01297-202ENST00000453395 DCAF8L1A6NGE4 600 aa21.8■■□□□ 1.08
LINC01297-202ENST00000453395 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
LINC01297-202ENST00000453395 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
LINC01297-202ENST00000453395 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
LINC01297-202ENST00000453395 FBLN2P98095 1184 aa21.75■■□□□ 1.07
LINC01297-202ENST00000453395 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
LINC01297-202ENST00000453395 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
LINC01297-202ENST00000453395 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
LINC01297-202ENST00000453395 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
LINC01297-202ENST00000453395 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
LINC01297-202ENST00000453395 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
LINC01297-202ENST00000453395 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms