RNA–Protein interactions for RNA: ENST00000447315.1

AL139275.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL139275.1, Length 824 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139275.1-201ENST00000447315 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
AL139275.1-201ENST00000447315 ABCC9O60706 1549 aa14.33□□□□□ -0.12
AL139275.1-201ENST00000447315 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
AL139275.1-201ENST00000447315 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
AL139275.1-201ENST00000447315 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
AL139275.1-201ENST00000447315 NACADO15069 1562 aa13.32□□□□□ -0.28
AL139275.1-201ENST00000447315 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
AL139275.1-201ENST00000447315 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
AL139275.1-201ENST00000447315 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
AL139275.1-201ENST00000447315 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
AL139275.1-201ENST00000447315 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
AL139275.1-201ENST00000447315 CC2D2AQ9P2K1 1620 aa12.94□□□□□ -0.34
AL139275.1-201ENST00000447315 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
AL139275.1-201ENST00000447315 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
AL139275.1-201ENST00000447315 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
AL139275.1-201ENST00000447315 ZCCHC6Q5VYS8 1495 aaKnown RBP12.81□□□□□ -0.36
AL139275.1-201ENST00000447315 DCAF1Q9Y4B6 1507 aa12.79□□□□□ -0.36
AL139275.1-201ENST00000447315 SCRIBQ14160 1630 aa12.78□□□□□ -0.36
AL139275.1-201ENST00000447315 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
AL139275.1-201ENST00000447315 CUX2O14529 1486 aa12.43□□□□□ -0.42
AL139275.1-201ENST00000447315 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
AL139275.1-201ENST00000447315 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
AL139275.1-201ENST00000447315 NESP48681 1621 aa12.26□□□□□ -0.45
AL139275.1-201ENST00000447315 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
AL139275.1-201ENST00000447315 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
AL139275.1-201ENST00000447315 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
AL139275.1-201ENST00000447315 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
AL139275.1-201ENST00000447315 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
AL139275.1-201ENST00000447315 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
AL139275.1-201ENST00000447315 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
AL139275.1-201ENST00000447315 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
AL139275.1-201ENST00000447315 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
AL139275.1-201ENST00000447315 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
AL139275.1-201ENST00000447315 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
AL139275.1-201ENST00000447315 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
AL139275.1-201ENST00000447315 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
AL139275.1-201ENST00000447315 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
AL139275.1-201ENST00000447315 WDR62O43379 1518 aa11.92□□□□□ -0.5
AL139275.1-201ENST00000447315 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
AL139275.1-201ENST00000447315 WIZO95785 1651 aa11.83□□□□□ -0.52
AL139275.1-201ENST00000447315 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
AL139275.1-201ENST00000447315 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
AL139275.1-201ENST00000447315 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
AL139275.1-201ENST00000447315 CFTRP13569 1480 aa11.75□□□□□ -0.53
AL139275.1-201ENST00000447315 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
AL139275.1-201ENST00000447315 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
AL139275.1-201ENST00000447315 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
AL139275.1-201ENST00000447315 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
AL139275.1-201ENST00000447315 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
AL139275.1-201ENST00000447315 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
AL139275.1-201ENST00000447315 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
AL139275.1-201ENST00000447315 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
AL139275.1-201ENST00000447315 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
AL139275.1-201ENST00000447315 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
AL139275.1-201ENST00000447315 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
AL139275.1-201ENST00000447315 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
AL139275.1-201ENST00000447315 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
AL139275.1-201ENST00000447315 ARAP1Q96P48 1450 aa11.54□□□□□ -0.56
AL139275.1-201ENST00000447315 CHD1O14646 1710 aa11.52□□□□□ -0.56
AL139275.1-201ENST00000447315 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
AL139275.1-201ENST00000447315 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
AL139275.1-201ENST00000447315 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
AL139275.1-201ENST00000447315 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
AL139275.1-201ENST00000447315 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.57
AL139275.1-201ENST00000447315 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
AL139275.1-201ENST00000447315 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
AL139275.1-201ENST00000447315 FBLN2P98095 1184 aa11.41□□□□□ -0.58
AL139275.1-201ENST00000447315 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
AL139275.1-201ENST00000447315 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
AL139275.1-201ENST00000447315 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
AL139275.1-201ENST00000447315 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
AL139275.1-201ENST00000447315 SOGA1O94964 1423 aa11.34□□□□□ -0.59
AL139275.1-201ENST00000447315 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
AL139275.1-201ENST00000447315 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
AL139275.1-201ENST00000447315 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
AL139275.1-201ENST00000447315 WDR97A6NE52 1622 aa11.29□□□□□ -0.6
AL139275.1-201ENST00000447315 MAGI1Q96QZ7 1491 aaPredicted RBP11.29□□□□□ -0.6
AL139275.1-201ENST00000447315 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
AL139275.1-201ENST00000447315 CUX1P39880 1505 aa11.27□□□□□ -0.61
AL139275.1-201ENST00000447315 SYNJ2O15056 1496 aa11.26□□□□□ -0.61
AL139275.1-201ENST00000447315 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
AL139275.1-201ENST00000447315 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
AL139275.1-201ENST00000447315 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
AL139275.1-201ENST00000447315 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
AL139275.1-201ENST00000447315 ABCA5Q8WWZ7 1642 aa11.18□□□□□ -0.62
AL139275.1-201ENST00000447315 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
AL139275.1-201ENST00000447315 CEP170Q5SW79 1584 aa11.14□□□□□ -0.63
AL139275.1-201ENST00000447315 KIF13AQ9H1H9 1805 aa11.14□□□□□ -0.63
AL139275.1-201ENST00000447315 GRIN2AQ12879 1464 aa11.13□□□□□ -0.63
AL139275.1-201ENST00000447315 NUP160Q12769 1436 aa11.12□□□□□ -0.63
AL139275.1-201ENST00000447315 CHIC1Q5VXU3 224 aa11.12□□□□□ -0.63
AL139275.1-201ENST00000447315 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
AL139275.1-201ENST00000447315 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
AL139275.1-201ENST00000447315 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
AL139275.1-201ENST00000447315 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
AL139275.1-201ENST00000447315 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
AL139275.1-201ENST00000447315 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
AL139275.1-201ENST00000447315 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
AL139275.1-201ENST00000447315 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
AL139275.1-201ENST00000447315 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms