RNA–Protein interactions for RNA: ENST00000445069.4

CLPB-204, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-204ENST00000445069 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
CLPB-204ENST00000445069 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
CLPB-204ENST00000445069 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
CLPB-204ENST00000445069 ABCC9O60706 1549 aa27.05■■□□□ 1.92
CLPB-204ENST00000445069 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
CLPB-204ENST00000445069 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
CLPB-204ENST00000445069 NACADO15069 1562 aa25.89■■□□□ 1.73
CLPB-204ENST00000445069 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
CLPB-204ENST00000445069 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
CLPB-204ENST00000445069 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
CLPB-204ENST00000445069 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
CLPB-204ENST00000445069 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
CLPB-204ENST00000445069 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
CLPB-204ENST00000445069 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
CLPB-204ENST00000445069 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.62
CLPB-204ENST00000445069 SCRIBQ14160 1630 aa24.99■■□□□ 1.59
CLPB-204ENST00000445069 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CLPB-204ENST00000445069 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
CLPB-204ENST00000445069 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
CLPB-204ENST00000445069 SENP3Q9H4L4 574 aaPredicted RBP24.37■■□□□ 1.49
CLPB-204ENST00000445069 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
CLPB-204ENST00000445069 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
CLPB-204ENST00000445069 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
CLPB-204ENST00000445069 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
CLPB-204ENST00000445069 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
CLPB-204ENST00000445069 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
CLPB-204ENST00000445069 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
CLPB-204ENST00000445069 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
CLPB-204ENST00000445069 PEG3Q9GZU2 1588 aa23.7■■□□□ 1.38
CLPB-204ENST00000445069 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
CLPB-204ENST00000445069 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
CLPB-204ENST00000445069 WIZO95785 1651 aa23.41■■□□□ 1.34
CLPB-204ENST00000445069 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
CLPB-204ENST00000445069 NESP48681 1621 aa23.33■■□□□ 1.32
CLPB-204ENST00000445069 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
CLPB-204ENST00000445069 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
CLPB-204ENST00000445069 CUX2O14529 1486 aa23.24■■□□□ 1.31
CLPB-204ENST00000445069 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
CLPB-204ENST00000445069 TOP2AP11388 1531 aaKnown RBP23.17■■□□□ 1.3
CLPB-204ENST00000445069 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
CLPB-204ENST00000445069 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
CLPB-204ENST00000445069 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
CLPB-204ENST00000445069 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
CLPB-204ENST00000445069 CFTRP13569 1480 aa22.98■■□□□ 1.27
CLPB-204ENST00000445069 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
CLPB-204ENST00000445069 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
CLPB-204ENST00000445069 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.25
CLPB-204ENST00000445069 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
CLPB-204ENST00000445069 FOXD1Q16676 465 aa22.88■■□□□ 1.25
CLPB-204ENST00000445069 WDR62O43379 1518 aa22.84■■□□□ 1.25
CLPB-204ENST00000445069 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
CLPB-204ENST00000445069 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
CLPB-204ENST00000445069 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
CLPB-204ENST00000445069 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
CLPB-204ENST00000445069 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
CLPB-204ENST00000445069 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
CLPB-204ENST00000445069 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
CLPB-204ENST00000445069 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
CLPB-204ENST00000445069 POLA1P09884 1462 aaPredicted RBP22.29■■□□□ 1.16
CLPB-204ENST00000445069 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
CLPB-204ENST00000445069 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
CLPB-204ENST00000445069 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
CLPB-204ENST00000445069 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
CLPB-204ENST00000445069 CUX1P39880 1505 aa22.21■■□□□ 1.15
CLPB-204ENST00000445069 SOGA1O94964 1423 aa22.2■■□□□ 1.14
CLPB-204ENST00000445069 FGD5Q6ZNL6 1462 aa22.19■■□□□ 1.14
CLPB-204ENST00000445069 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
CLPB-204ENST00000445069 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
CLPB-204ENST00000445069 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLPB-204ENST00000445069 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
CLPB-204ENST00000445069 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
CLPB-204ENST00000445069 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
CLPB-204ENST00000445069 TOP2BQ02880 1626 aa22■■□□□ 1.11
CLPB-204ENST00000445069 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
CLPB-204ENST00000445069 CHD1O14646 1710 aa21.99■■□□□ 1.11
CLPB-204ENST00000445069 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
CLPB-204ENST00000445069 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
CLPB-204ENST00000445069 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
CLPB-204ENST00000445069 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
CLPB-204ENST00000445069 FBLN2P98095 1184 aa21.95■■□□□ 1.1
CLPB-204ENST00000445069 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
CLPB-204ENST00000445069 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
CLPB-204ENST00000445069 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
CLPB-204ENST00000445069 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
CLPB-204ENST00000445069 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
CLPB-204ENST00000445069 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
CLPB-204ENST00000445069 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
CLPB-204ENST00000445069 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
CLPB-204ENST00000445069 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
CLPB-204ENST00000445069 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
CLPB-204ENST00000445069 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
CLPB-204ENST00000445069 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
CLPB-204ENST00000445069 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
CLPB-204ENST00000445069 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
CLPB-204ENST00000445069 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
CLPB-204ENST00000445069 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
CLPB-204ENST00000445069 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
CLPB-204ENST00000445069 NUP160Q12769 1436 aa21.61■■□□□ 1.05
CLPB-204ENST00000445069 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
CLPB-204ENST00000445069 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms