RNA–Protein interactions for RNA: ENST00000437719.5

DKC1-205, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 3

Gene DKC1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-205ENST00000437719 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
DKC1-205ENST00000437719 AEBP2Q6ZN18 517 aaPredicted RBP24.34■■□□□ 1.49
DKC1-205ENST00000437719 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
DKC1-205ENST00000437719 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
DKC1-205ENST00000437719 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
DKC1-205ENST00000437719 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
DKC1-205ENST00000437719 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
DKC1-205ENST00000437719 ABCC9O60706 1549 aa20.09■□□□□ 0.81
DKC1-205ENST00000437719 FOXD1Q16676 465 aa19.27■□□□□ 0.68
DKC1-205ENST00000437719 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
DKC1-205ENST00000437719 NACADO15069 1562 aa19.04■□□□□ 0.64
DKC1-205ENST00000437719 ADRA2BP18089 450 aa19■□□□□ 0.63
DKC1-205ENST00000437719 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
DKC1-205ENST00000437719 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
DKC1-205ENST00000437719 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
DKC1-205ENST00000437719 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
DKC1-205ENST00000437719 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
DKC1-205ENST00000437719 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
DKC1-205ENST00000437719 KCNA4P22459 653 aa18.61■□□□□ 0.57
DKC1-205ENST00000437719 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
DKC1-205ENST00000437719 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
DKC1-205ENST00000437719 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
DKC1-205ENST00000437719 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
DKC1-205ENST00000437719 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
DKC1-205ENST00000437719 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
DKC1-205ENST00000437719 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
DKC1-205ENST00000437719 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
DKC1-205ENST00000437719 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
DKC1-205ENST00000437719 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
DKC1-205ENST00000437719 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
DKC1-205ENST00000437719 MSH5O43196 834 aa17.96■□□□□ 0.47
DKC1-205ENST00000437719 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
DKC1-205ENST00000437719 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
DKC1-205ENST00000437719 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
DKC1-205ENST00000437719 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
DKC1-205ENST00000437719 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
DKC1-205ENST00000437719 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
DKC1-205ENST00000437719 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
DKC1-205ENST00000437719 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
DKC1-205ENST00000437719 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
DKC1-205ENST00000437719 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
DKC1-205ENST00000437719 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
DKC1-205ENST00000437719 CUX2O14529 1486 aa17.35■□□□□ 0.37
DKC1-205ENST00000437719 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
DKC1-205ENST00000437719 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
DKC1-205ENST00000437719 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
DKC1-205ENST00000437719 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
DKC1-205ENST00000437719 NESP48681 1621 aa17.24■□□□□ 0.35
DKC1-205ENST00000437719 ZBTB22O15209 634 aa17.22■□□□□ 0.35
DKC1-205ENST00000437719 MROH2BQ7Z745 1585 aa17.22■□□□□ 0.35
DKC1-205ENST00000437719 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
DKC1-205ENST00000437719 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
DKC1-205ENST00000437719 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
DKC1-205ENST00000437719 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
DKC1-205ENST00000437719 WIZO95785 1651 aa17.1■□□□□ 0.33
DKC1-205ENST00000437719 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
DKC1-205ENST00000437719 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
DKC1-205ENST00000437719 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
DKC1-205ENST00000437719 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
DKC1-205ENST00000437719 WDR62O43379 1518 aa16.86■□□□□ 0.29
DKC1-205ENST00000437719 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
DKC1-205ENST00000437719 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
DKC1-205ENST00000437719 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
DKC1-205ENST00000437719 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
DKC1-205ENST00000437719 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
DKC1-205ENST00000437719 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
DKC1-205ENST00000437719 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
DKC1-205ENST00000437719 CFTRP13569 1480 aa16.78■□□□□ 0.28
DKC1-205ENST00000437719 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
DKC1-205ENST00000437719 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
DKC1-205ENST00000437719 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
DKC1-205ENST00000437719 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
DKC1-205ENST00000437719 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
DKC1-205ENST00000437719 DMRT2Q9Y5R5 561 aa16.52■□□□□ 0.24
DKC1-205ENST00000437719 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
DKC1-205ENST00000437719 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
DKC1-205ENST00000437719 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
DKC1-205ENST00000437719 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
DKC1-205ENST00000437719 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
DKC1-205ENST00000437719 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
DKC1-205ENST00000437719 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
DKC1-205ENST00000437719 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
DKC1-205ENST00000437719 CHD1O14646 1710 aa16.39■□□□□ 0.21
DKC1-205ENST00000437719 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
DKC1-205ENST00000437719 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
DKC1-205ENST00000437719 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
DKC1-205ENST00000437719 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
DKC1-205ENST00000437719 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
DKC1-205ENST00000437719 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.23e-13■■■■■ 26.9
DKC1-205ENST00000437719 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
DKC1-205ENST00000437719 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
DKC1-205ENST00000437719 FBLN2P98095 1184 aa16.25■□□□□ 0.19
DKC1-205ENST00000437719 SOGA1O94964 1423 aa16.25■□□□□ 0.19
DKC1-205ENST00000437719 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
DKC1-205ENST00000437719 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
DKC1-205ENST00000437719 ATXN8OSP0DMR3 200 aa16.22■□□□□ 0.19
DKC1-205ENST00000437719 CUX1P39880 1505 aa16.19■□□□□ 0.18
DKC1-205ENST00000437719 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
DKC1-205ENST00000437719 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
DKC1-205ENST00000437719 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms