RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
COPS7B-212ENST00000436564 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
COPS7B-212ENST00000436564 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
COPS7B-212ENST00000436564 ABCC9O60706 1549 aa25.24■■□□□ 1.63
COPS7B-212ENST00000436564 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
COPS7B-212ENST00000436564 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
COPS7B-212ENST00000436564 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
COPS7B-212ENST00000436564 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
COPS7B-212ENST00000436564 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
COPS7B-212ENST00000436564 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
COPS7B-212ENST00000436564 NACADO15069 1562 aa23.55■■□□□ 1.36
COPS7B-212ENST00000436564 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
COPS7B-212ENST00000436564 MYO15BQ96JP2 1530 aa23.09■■□□□ 1.29
COPS7B-212ENST00000436564 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.28
COPS7B-212ENST00000436564 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
COPS7B-212ENST00000436564 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
COPS7B-212ENST00000436564 FOXD1Q16676 465 aa22.8■■□□□ 1.24
COPS7B-212ENST00000436564 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
COPS7B-212ENST00000436564 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
COPS7B-212ENST00000436564 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
COPS7B-212ENST00000436564 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
COPS7B-212ENST00000436564 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
COPS7B-212ENST00000436564 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.2
COPS7B-212ENST00000436564 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
COPS7B-212ENST00000436564 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
COPS7B-212ENST00000436564 CUX2O14529 1486 aa21.89■■□□□ 1.09
COPS7B-212ENST00000436564 ERCC6Q03468 1493 aa21.85■■□□□ 1.09
COPS7B-212ENST00000436564 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
COPS7B-212ENST00000436564 ADRA2BP18089 450 aa21.78■■□□□ 1.08
COPS7B-212ENST00000436564 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
COPS7B-212ENST00000436564 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
COPS7B-212ENST00000436564 PIAS4Q8N2W9 510 aaPredicted RBP21.6■■□□□ 1.05
COPS7B-212ENST00000436564 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
COPS7B-212ENST00000436564 NESP48681 1621 aa21.55■■□□□ 1.04
COPS7B-212ENST00000436564 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
COPS7B-212ENST00000436564 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
COPS7B-212ENST00000436564 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
COPS7B-212ENST00000436564 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
COPS7B-212ENST00000436564 MSH5O43196 834 aa21.34■■□□□ 1.01
COPS7B-212ENST00000436564 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
COPS7B-212ENST00000436564 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
COPS7B-212ENST00000436564 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
COPS7B-212ENST00000436564 TRIM41Q8WV44 630 aa21.29■■□□□ 1
COPS7B-212ENST00000436564 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
COPS7B-212ENST00000436564 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
COPS7B-212ENST00000436564 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
COPS7B-212ENST00000436564 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
COPS7B-212ENST00000436564 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
COPS7B-212ENST00000436564 WDR62O43379 1518 aa21■□□□□ 0.95
COPS7B-212ENST00000436564 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
COPS7B-212ENST00000436564 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
COPS7B-212ENST00000436564 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
COPS7B-212ENST00000436564 WIZO95785 1651 aa20.85■□□□□ 0.93
COPS7B-212ENST00000436564 CFTRP13569 1480 aa20.78■□□□□ 0.92
COPS7B-212ENST00000436564 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
COPS7B-212ENST00000436564 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
COPS7B-212ENST00000436564 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
COPS7B-212ENST00000436564 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
COPS7B-212ENST00000436564 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
COPS7B-212ENST00000436564 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
COPS7B-212ENST00000436564 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
COPS7B-212ENST00000436564 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
COPS7B-212ENST00000436564 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
COPS7B-212ENST00000436564 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
COPS7B-212ENST00000436564 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
COPS7B-212ENST00000436564 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
COPS7B-212ENST00000436564 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
COPS7B-212ENST00000436564 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
COPS7B-212ENST00000436564 FBLN2P98095 1184 aa20.36■□□□□ 0.85
COPS7B-212ENST00000436564 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
COPS7B-212ENST00000436564 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
COPS7B-212ENST00000436564 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■■■■■ 29.8
COPS7B-212ENST00000436564 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
COPS7B-212ENST00000436564 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
COPS7B-212ENST00000436564 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
COPS7B-212ENST00000436564 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
COPS7B-212ENST00000436564 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
COPS7B-212ENST00000436564 CHD1O14646 1710 aa20.18■□□□□ 0.82
COPS7B-212ENST00000436564 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
COPS7B-212ENST00000436564 SOGA1O94964 1423 aa20.15■□□□□ 0.82
COPS7B-212ENST00000436564 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
COPS7B-212ENST00000436564 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
COPS7B-212ENST00000436564 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
COPS7B-212ENST00000436564 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
COPS7B-212ENST00000436564 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
COPS7B-212ENST00000436564 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
COPS7B-212ENST00000436564 SYNJ1O43426 1573 aa20■□□□□ 0.79
COPS7B-212ENST00000436564 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
COPS7B-212ENST00000436564 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
COPS7B-212ENST00000436564 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
COPS7B-212ENST00000436564 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
COPS7B-212ENST00000436564 CUX1P39880 1505 aa19.91■□□□□ 0.78
COPS7B-212ENST00000436564 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
COPS7B-212ENST00000436564 NCBP3Q53F19 620 aaKnown RBP19.78■□□□□ 0.76
COPS7B-212ENST00000436564 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
COPS7B-212ENST00000436564 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
COPS7B-212ENST00000436564 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
COPS7B-212ENST00000436564 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
COPS7B-212ENST00000436564 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
COPS7B-212ENST00000436564 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms