RNA–Protein interactions for RNA: ENST00000435554.1

AL513348.1-201, humanhuman

TSL 3 BASIC

Gene AL513348.1, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513348.1-201ENST00000435554 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
AL513348.1-201ENST00000435554 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
AL513348.1-201ENST00000435554 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
AL513348.1-201ENST00000435554 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
AL513348.1-201ENST00000435554 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
AL513348.1-201ENST00000435554 ABCC9O60706 1549 aa15.35■□□□□ 0.05
AL513348.1-201ENST00000435554 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
AL513348.1-201ENST00000435554 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
AL513348.1-201ENST00000435554 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
AL513348.1-201ENST00000435554 FOXD1Q16676 465 aa14.57□□□□□ -0.08
AL513348.1-201ENST00000435554 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
AL513348.1-201ENST00000435554 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
AL513348.1-201ENST00000435554 NACADO15069 1562 aa14.33□□□□□ -0.12
AL513348.1-201ENST00000435554 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
AL513348.1-201ENST00000435554 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
AL513348.1-201ENST00000435554 UNC13AQ9UPW8 1703 aa14.12□□□□□ -0.15
AL513348.1-201ENST00000435554 ADRA2BP18089 450 aa14.1□□□□□ -0.15
AL513348.1-201ENST00000435554 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
AL513348.1-201ENST00000435554 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
AL513348.1-201ENST00000435554 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
AL513348.1-201ENST00000435554 CC2D2AQ9P2K1 1620 aa13.83□□□□□ -0.2
AL513348.1-201ENST00000435554 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
AL513348.1-201ENST00000435554 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
AL513348.1-201ENST00000435554 DCAF1Q9Y4B6 1507 aa13.76□□□□□ -0.21
AL513348.1-201ENST00000435554 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
AL513348.1-201ENST00000435554 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
AL513348.1-201ENST00000435554 PIAS4Q8N2W9 510 aaPredicted RBP13.69□□□□□ -0.22
AL513348.1-201ENST00000435554 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
AL513348.1-201ENST00000435554 CUX2O14529 1486 aa13.31□□□□□ -0.28
AL513348.1-201ENST00000435554 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
AL513348.1-201ENST00000435554 MSH5O43196 834 aa13.25□□□□□ -0.29
AL513348.1-201ENST00000435554 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
AL513348.1-201ENST00000435554 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
AL513348.1-201ENST00000435554 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
AL513348.1-201ENST00000435554 NESP48681 1621 aa13.1□□□□□ -0.31
AL513348.1-201ENST00000435554 HMGXB3Q12766 1538 aa13.09□□□□□ -0.31
AL513348.1-201ENST00000435554 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
AL513348.1-201ENST00000435554 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
AL513348.1-201ENST00000435554 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
AL513348.1-201ENST00000435554 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
AL513348.1-201ENST00000435554 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
AL513348.1-201ENST00000435554 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
AL513348.1-201ENST00000435554 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
AL513348.1-201ENST00000435554 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
AL513348.1-201ENST00000435554 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
AL513348.1-201ENST00000435554 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
AL513348.1-201ENST00000435554 KCNA4P22459 653 aa12.89□□□□□ -0.35
AL513348.1-201ENST00000435554 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
AL513348.1-201ENST00000435554 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
AL513348.1-201ENST00000435554 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
AL513348.1-201ENST00000435554 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
AL513348.1-201ENST00000435554 WDR62O43379 1518 aa12.77□□□□□ -0.37
AL513348.1-201ENST00000435554 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
AL513348.1-201ENST00000435554 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
AL513348.1-201ENST00000435554 WIZO95785 1651 aa12.71□□□□□ -0.37
AL513348.1-201ENST00000435554 FANCD2Q9BXW9 1451 aa12.69□□□□□ -0.38
AL513348.1-201ENST00000435554 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
AL513348.1-201ENST00000435554 CFTRP13569 1480 aa12.62□□□□□ -0.39
AL513348.1-201ENST00000435554 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
AL513348.1-201ENST00000435554 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
AL513348.1-201ENST00000435554 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
AL513348.1-201ENST00000435554 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
AL513348.1-201ENST00000435554 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
AL513348.1-201ENST00000435554 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.4
AL513348.1-201ENST00000435554 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
AL513348.1-201ENST00000435554 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
AL513348.1-201ENST00000435554 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
AL513348.1-201ENST00000435554 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
AL513348.1-201ENST00000435554 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
AL513348.1-201ENST00000435554 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
AL513348.1-201ENST00000435554 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
AL513348.1-201ENST00000435554 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
AL513348.1-201ENST00000435554 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
AL513348.1-201ENST00000435554 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
AL513348.1-201ENST00000435554 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
AL513348.1-201ENST00000435554 FBLN2P98095 1184 aa12.4□□□□□ -0.42
AL513348.1-201ENST00000435554 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.43
AL513348.1-201ENST00000435554 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
AL513348.1-201ENST00000435554 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
AL513348.1-201ENST00000435554 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
AL513348.1-201ENST00000435554 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
AL513348.1-201ENST00000435554 CHD1O14646 1710 aa12.34□□□□□ -0.43
AL513348.1-201ENST00000435554 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
AL513348.1-201ENST00000435554 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
AL513348.1-201ENST00000435554 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
AL513348.1-201ENST00000435554 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
AL513348.1-201ENST00000435554 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
AL513348.1-201ENST00000435554 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
AL513348.1-201ENST00000435554 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
AL513348.1-201ENST00000435554 SOGA1O94964 1423 aa12.24□□□□□ -0.45
AL513348.1-201ENST00000435554 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
AL513348.1-201ENST00000435554 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
AL513348.1-201ENST00000435554 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
AL513348.1-201ENST00000435554 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
AL513348.1-201ENST00000435554 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
AL513348.1-201ENST00000435554 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
AL513348.1-201ENST00000435554 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
AL513348.1-201ENST00000435554 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
AL513348.1-201ENST00000435554 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
AL513348.1-201ENST00000435554 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms