RNA–Protein interactions for RNA: ENST00000433685.5

HDAC7-211, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-211ENST00000433685 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
HDAC7-211ENST00000433685 CCDC180Q9P1Z9 1646 aa33.43■■■□□ 2.94
HDAC7-211ENST00000433685 ABCC9O60706 1549 aa33.02■■■□□ 2.88
HDAC7-211ENST00000433685 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
HDAC7-211ENST00000433685 NACADO15069 1562 aa31.48■■■□□ 2.63
HDAC7-211ENST00000433685 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
HDAC7-211ENST00000433685 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
HDAC7-211ENST00000433685 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.56
HDAC7-211ENST00000433685 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
HDAC7-211ENST00000433685 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
HDAC7-211ENST00000433685 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
HDAC7-211ENST00000433685 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
HDAC7-211ENST00000433685 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
HDAC7-211ENST00000433685 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
HDAC7-211ENST00000433685 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
HDAC7-211ENST00000433685 EIF4G1Q04637 1599 aaKnown RBP29.9■■■□□ 2.38
HDAC7-211ENST00000433685 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.37
HDAC7-211ENST00000433685 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
HDAC7-211ENST00000433685 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
HDAC7-211ENST00000433685 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
HDAC7-211ENST00000433685 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
HDAC7-211ENST00000433685 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
HDAC7-211ENST00000433685 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
HDAC7-211ENST00000433685 HMGXB3Q12766 1538 aa28.88■■■□□ 2.21
HDAC7-211ENST00000433685 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
HDAC7-211ENST00000433685 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
HDAC7-211ENST00000433685 BAZ1BQ9UIG0 1483 aaKnown RBP28.74■■■□□ 2.19
HDAC7-211ENST00000433685 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
HDAC7-211ENST00000433685 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
HDAC7-211ENST00000433685 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
HDAC7-211ENST00000433685 WIZO95785 1651 aa28.47■■■□□ 2.15
HDAC7-211ENST00000433685 NESP48681 1621 aa28.46■■■□□ 2.15
HDAC7-211ENST00000433685 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
HDAC7-211ENST00000433685 CUX2O14529 1486 aa28.34■■■□□ 2.13
HDAC7-211ENST00000433685 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
HDAC7-211ENST00000433685 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
HDAC7-211ENST00000433685 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
HDAC7-211ENST00000433685 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
HDAC7-211ENST00000433685 CADPSQ9ULU8 1353 aa28.14■■■□□ 2.1
HDAC7-211ENST00000433685 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
HDAC7-211ENST00000433685 CFTRP13569 1480 aa27.91■■■□□ 2.06
HDAC7-211ENST00000433685 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
HDAC7-211ENST00000433685 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
HDAC7-211ENST00000433685 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
HDAC7-211ENST00000433685 WDR62O43379 1518 aa27.83■■■□□ 2.05
HDAC7-211ENST00000433685 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
HDAC7-211ENST00000433685 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.04
HDAC7-211ENST00000433685 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
HDAC7-211ENST00000433685 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
HDAC7-211ENST00000433685 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
HDAC7-211ENST00000433685 DNMBPQ6XZF7 1577 aa27.32■■□□□ 1.96
HDAC7-211ENST00000433685 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
HDAC7-211ENST00000433685 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
HDAC7-211ENST00000433685 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
HDAC7-211ENST00000433685 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
HDAC7-211ENST00000433685 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
HDAC7-211ENST00000433685 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
HDAC7-211ENST00000433685 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
HDAC7-211ENST00000433685 CUX1P39880 1505 aa27.01■■□□□ 1.91
HDAC7-211ENST00000433685 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
HDAC7-211ENST00000433685 AQRO60306 1485 aaKnown RBP eCLIP26.98■■□□□ 1.919e-7■■■■□ 23.5
HDAC7-211ENST00000433685 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
HDAC7-211ENST00000433685 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
HDAC7-211ENST00000433685 SOGA1O94964 1423 aa26.97■■□□□ 1.91
HDAC7-211ENST00000433685 WRNQ14191 1432 aaPredicted RBP eCLIP26.91■■□□□ 1.95e-6■■■■■ 29.2
HDAC7-211ENST00000433685 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
HDAC7-211ENST00000433685 CHD1O14646 1710 aa26.88■■□□□ 1.89
HDAC7-211ENST00000433685 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
HDAC7-211ENST00000433685 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
HDAC7-211ENST00000433685 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
HDAC7-211ENST00000433685 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
HDAC7-211ENST00000433685 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
HDAC7-211ENST00000433685 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
HDAC7-211ENST00000433685 FBLN2P98095 1184 aa26.73■■□□□ 1.87
HDAC7-211ENST00000433685 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
HDAC7-211ENST00000433685 GRIN2BQ13224 1484 aa26.72■■□□□ 1.87
HDAC7-211ENST00000433685 PBRM1Q86U86 1689 aa26.71■■□□□ 1.87
HDAC7-211ENST00000433685 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
HDAC7-211ENST00000433685 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
HDAC7-211ENST00000433685 MAGI1Q96QZ7 1491 aaPredicted RBP26.69■■□□□ 1.86
HDAC7-211ENST00000433685 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
HDAC7-211ENST00000433685 ARHGEF11O15085 1522 aa26.66■■□□□ 1.86
HDAC7-211ENST00000433685 ABCA5Q8WWZ7 1642 aa26.66■■□□□ 1.86
HDAC7-211ENST00000433685 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
HDAC7-211ENST00000433685 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
HDAC7-211ENST00000433685 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
HDAC7-211ENST00000433685 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
HDAC7-211ENST00000433685 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
HDAC7-211ENST00000433685 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
HDAC7-211ENST00000433685 FAM9AQ8IZU1 332 aaPredicted RBP26.4■■□□□ 1.82
HDAC7-211ENST00000433685 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
HDAC7-211ENST00000433685 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
HDAC7-211ENST00000433685 EEA1Q15075 1411 aa26.37■■□□□ 1.81
HDAC7-211ENST00000433685 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
HDAC7-211ENST00000433685 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
HDAC7-211ENST00000433685 CEP170Q5SW79 1584 aa26.28■■□□□ 1.8
HDAC7-211ENST00000433685 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
HDAC7-211ENST00000433685 NUP160Q12769 1436 aa26.26■■□□□ 1.79
HDAC7-211ENST00000433685 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
HDAC7-211ENST00000433685 SHROOM2Q13796 1616 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms