RNA–Protein interactions for RNA: ENST00000433194.6

CDK5RAP2-206, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 3

Gene CDK5RAP2, Length 815 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-206ENST00000433194 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
CDK5RAP2-206ENST00000433194 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
CDK5RAP2-206ENST00000433194 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
CDK5RAP2-206ENST00000433194 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
CDK5RAP2-206ENST00000433194 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
CDK5RAP2-206ENST00000433194 ABCC9O60706 1549 aa23.83■■□□□ 1.41
CDK5RAP2-206ENST00000433194 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
CDK5RAP2-206ENST00000433194 FOXD1Q16676 465 aa22.79■■□□□ 1.24
CDK5RAP2-206ENST00000433194 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
CDK5RAP2-206ENST00000433194 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
CDK5RAP2-206ENST00000433194 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
CDK5RAP2-206ENST00000433194 NACADO15069 1562 aa22.33■■□□□ 1.17
CDK5RAP2-206ENST00000433194 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.162e-6■□□□□ 9.6
CDK5RAP2-206ENST00000433194 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
CDK5RAP2-206ENST00000433194 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
CDK5RAP2-206ENST00000433194 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
CDK5RAP2-206ENST00000433194 BICRAQ9NZM4 1560 aa21.77■■□□□ 1.08
CDK5RAP2-206ENST00000433194 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
CDK5RAP2-206ENST00000433194 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
CDK5RAP2-206ENST00000433194 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
CDK5RAP2-206ENST00000433194 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
CDK5RAP2-206ENST00000433194 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
CDK5RAP2-206ENST00000433194 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
CDK5RAP2-206ENST00000433194 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
CDK5RAP2-206ENST00000433194 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
CDK5RAP2-206ENST00000433194 MSH5O43196 834 aa21.39■■□□□ 1.01
CDK5RAP2-206ENST00000433194 ADRA2BP18089 450 aa21.38■■□□□ 1.01
CDK5RAP2-206ENST00000433194 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
CDK5RAP2-206ENST00000433194 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
CDK5RAP2-206ENST00000433194 NCAPD3P42695 1498 aa20.67■□□□□ 0.9
CDK5RAP2-206ENST00000433194 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
CDK5RAP2-206ENST00000433194 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
CDK5RAP2-206ENST00000433194 CUX2O14529 1486 aa20.55■□□□□ 0.88
CDK5RAP2-206ENST00000433194 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
CDK5RAP2-206ENST00000433194 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
CDK5RAP2-206ENST00000433194 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
CDK5RAP2-206ENST00000433194 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
CDK5RAP2-206ENST00000433194 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
CDK5RAP2-206ENST00000433194 NESP48681 1621 aa20.37■□□□□ 0.85
CDK5RAP2-206ENST00000433194 POTEDQ86YR6 584 aa20.32■□□□□ 0.84
CDK5RAP2-206ENST00000433194 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
CDK5RAP2-206ENST00000433194 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
CDK5RAP2-206ENST00000433194 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
CDK5RAP2-206ENST00000433194 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
CDK5RAP2-206ENST00000433194 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
CDK5RAP2-206ENST00000433194 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP2-206ENST00000433194 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
CDK5RAP2-206ENST00000433194 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
CDK5RAP2-206ENST00000433194 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
CDK5RAP2-206ENST00000433194 WIZO95785 1651 aa19.91■□□□□ 0.78
CDK5RAP2-206ENST00000433194 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
CDK5RAP2-206ENST00000433194 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
CDK5RAP2-206ENST00000433194 WDR62O43379 1518 aa19.81■□□□□ 0.76
CDK5RAP2-206ENST00000433194 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
CDK5RAP2-206ENST00000433194 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP2-206ENST00000433194 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP2-206ENST00000433194 CFTRP13569 1480 aa19.75■□□□□ 0.75
CDK5RAP2-206ENST00000433194 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP2-206ENST00000433194 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP2-206ENST00000433194 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP2-206ENST00000433194 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
CDK5RAP2-206ENST00000433194 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
CDK5RAP2-206ENST00000433194 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
CDK5RAP2-206ENST00000433194 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
CDK5RAP2-206ENST00000433194 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
CDK5RAP2-206ENST00000433194 ZNF608Q9ULD9 1512 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP2-206ENST00000433194 FBLN2P98095 1184 aa19.41■□□□□ 0.7
CDK5RAP2-206ENST00000433194 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
CDK5RAP2-206ENST00000433194 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
CDK5RAP2-206ENST00000433194 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
CDK5RAP2-206ENST00000433194 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■■■□ 19.8
CDK5RAP2-206ENST00000433194 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
CDK5RAP2-206ENST00000433194 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
CDK5RAP2-206ENST00000433194 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
CDK5RAP2-206ENST00000433194 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
CDK5RAP2-206ENST00000433194 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP2-206ENST00000433194 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
CDK5RAP2-206ENST00000433194 SOGA1O94964 1423 aa19.22■□□□□ 0.67
CDK5RAP2-206ENST00000433194 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP2-206ENST00000433194 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP2-206ENST00000433194 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP2-206ENST00000433194 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP2-206ENST00000433194 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
CDK5RAP2-206ENST00000433194 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP2-206ENST00000433194 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
CDK5RAP2-206ENST00000433194 CHD1O14646 1710 aa19.06■□□□□ 0.64
CDK5RAP2-206ENST00000433194 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
CDK5RAP2-206ENST00000433194 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
CDK5RAP2-206ENST00000433194 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
CDK5RAP2-206ENST00000433194 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
CDK5RAP2-206ENST00000433194 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
CDK5RAP2-206ENST00000433194 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP2-206ENST00000433194 CUX1P39880 1505 aa18.96■□□□□ 0.63
CDK5RAP2-206ENST00000433194 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
CDK5RAP2-206ENST00000433194 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
CDK5RAP2-206ENST00000433194 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
CDK5RAP2-206ENST00000433194 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
CDK5RAP2-206ENST00000433194 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP2-206ENST00000433194 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP2-206ENST00000433194 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms