RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
SMPD4P1-202ENST00000433066 ABCC9O60706 1549 aa17.58■□□□□ 0.41
SMPD4P1-202ENST00000433066 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
SMPD4P1-202ENST00000433066 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
SMPD4P1-202ENST00000433066 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
SMPD4P1-202ENST00000433066 NACADO15069 1562 aa16.32■□□□□ 0.2
SMPD4P1-202ENST00000433066 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMPD4P1-202ENST00000433066 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
SMPD4P1-202ENST00000433066 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
SMPD4P1-202ENST00000433066 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
SMPD4P1-202ENST00000433066 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
SMPD4P1-202ENST00000433066 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
SMPD4P1-202ENST00000433066 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
SMPD4P1-202ENST00000433066 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
SMPD4P1-202ENST00000433066 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SMPD4P1-202ENST00000433066 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
SMPD4P1-202ENST00000433066 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
SMPD4P1-202ENST00000433066 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
SMPD4P1-202ENST00000433066 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
SMPD4P1-202ENST00000433066 CUX2O14529 1486 aa15.36■□□□□ 0.05
SMPD4P1-202ENST00000433066 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
SMPD4P1-202ENST00000433066 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
SMPD4P1-202ENST00000433066 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
SMPD4P1-202ENST00000433066 NESP48681 1621 aa15□□□□□ -0.01
SMPD4P1-202ENST00000433066 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
SMPD4P1-202ENST00000433066 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
SMPD4P1-202ENST00000433066 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
SMPD4P1-202ENST00000433066 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
SMPD4P1-202ENST00000433066 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
SMPD4P1-202ENST00000433066 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
SMPD4P1-202ENST00000433066 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
SMPD4P1-202ENST00000433066 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
SMPD4P1-202ENST00000433066 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
SMPD4P1-202ENST00000433066 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
SMPD4P1-202ENST00000433066 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
SMPD4P1-202ENST00000433066 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
SMPD4P1-202ENST00000433066 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
SMPD4P1-202ENST00000433066 WDR62O43379 1518 aa14.64□□□□□ -0.07
SMPD4P1-202ENST00000433066 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
SMPD4P1-202ENST00000433066 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
SMPD4P1-202ENST00000433066 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
SMPD4P1-202ENST00000433066 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
SMPD4P1-202ENST00000433066 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
SMPD4P1-202ENST00000433066 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
SMPD4P1-202ENST00000433066 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
SMPD4P1-202ENST00000433066 CFTRP13569 1480 aa14.37□□□□□ -0.11
SMPD4P1-202ENST00000433066 ARHGEF11O15085 1522 aa14.35□□□□□ -0.11
SMPD4P1-202ENST00000433066 WIZO95785 1651 aa14.34□□□□□ -0.11
SMPD4P1-202ENST00000433066 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
SMPD4P1-202ENST00000433066 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
SMPD4P1-202ENST00000433066 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
SMPD4P1-202ENST00000433066 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
SMPD4P1-202ENST00000433066 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
SMPD4P1-202ENST00000433066 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
SMPD4P1-202ENST00000433066 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
SMPD4P1-202ENST00000433066 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
SMPD4P1-202ENST00000433066 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
SMPD4P1-202ENST00000433066 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
SMPD4P1-202ENST00000433066 CHD1O14646 1710 aa14.07□□□□□ -0.16
SMPD4P1-202ENST00000433066 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMPD4P1-202ENST00000433066 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
SMPD4P1-202ENST00000433066 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
SMPD4P1-202ENST00000433066 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
SMPD4P1-202ENST00000433066 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
SMPD4P1-202ENST00000433066 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
SMPD4P1-202ENST00000433066 FBLN2P98095 1184 aa13.96□□□□□ -0.17
SMPD4P1-202ENST00000433066 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
SMPD4P1-202ENST00000433066 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
SMPD4P1-202ENST00000433066 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
SMPD4P1-202ENST00000433066 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
SMPD4P1-202ENST00000433066 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
SMPD4P1-202ENST00000433066 SOGA1O94964 1423 aa13.85□□□□□ -0.19
SMPD4P1-202ENST00000433066 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
SMPD4P1-202ENST00000433066 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
SMPD4P1-202ENST00000433066 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
SMPD4P1-202ENST00000433066 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
SMPD4P1-202ENST00000433066 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
SMPD4P1-202ENST00000433066 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
SMPD4P1-202ENST00000433066 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
SMPD4P1-202ENST00000433066 CUX1P39880 1505 aa13.74□□□□□ -0.21
SMPD4P1-202ENST00000433066 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
SMPD4P1-202ENST00000433066 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
SMPD4P1-202ENST00000433066 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
SMPD4P1-202ENST00000433066 NUP160Q12769 1436 aa13.64□□□□□ -0.23
SMPD4P1-202ENST00000433066 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
SMPD4P1-202ENST00000433066 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
SMPD4P1-202ENST00000433066 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
SMPD4P1-202ENST00000433066 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
SMPD4P1-202ENST00000433066 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
SMPD4P1-202ENST00000433066 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
SMPD4P1-202ENST00000433066 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
SMPD4P1-202ENST00000433066 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
SMPD4P1-202ENST00000433066 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
SMPD4P1-202ENST00000433066 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
SMPD4P1-202ENST00000433066 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
SMPD4P1-202ENST00000433066 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
SMPD4P1-202ENST00000433066 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms