RNA–Protein interactions for RNA: ENST00000432287.6

SDHC-204, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-204ENST00000432287 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
SDHC-204ENST00000432287 ABCC9O60706 1549 aa17.93■□□□□ 0.46
SDHC-204ENST00000432287 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
SDHC-204ENST00000432287 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
SDHC-204ENST00000432287 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
SDHC-204ENST00000432287 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
SDHC-204ENST00000432287 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
SDHC-204ENST00000432287 NACADO15069 1562 aa16.51■□□□□ 0.23
SDHC-204ENST00000432287 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
SDHC-204ENST00000432287 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
SDHC-204ENST00000432287 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
SDHC-204ENST00000432287 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
SDHC-204ENST00000432287 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
SDHC-204ENST00000432287 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
SDHC-204ENST00000432287 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
SDHC-204ENST00000432287 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
SDHC-204ENST00000432287 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
SDHC-204ENST00000432287 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
SDHC-204ENST00000432287 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
SDHC-204ENST00000432287 CUX2O14529 1486 aa15.62■□□□□ 0.09
SDHC-204ENST00000432287 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
SDHC-204ENST00000432287 NESP48681 1621 aa15.32■□□□□ 0.04
SDHC-204ENST00000432287 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
SDHC-204ENST00000432287 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
SDHC-204ENST00000432287 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
SDHC-204ENST00000432287 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
SDHC-204ENST00000432287 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
SDHC-204ENST00000432287 KIF21AQ7Z4S6 1674 aa15.08■□□□□ 0
SDHC-204ENST00000432287 SMARCA2P51531 1590 aa15.05■□□□□ -0
SDHC-204ENST00000432287 SMARCA4P51532 1647 aa15.04■□□□□ -0
SDHC-204ENST00000432287 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
SDHC-204ENST00000432287 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
SDHC-204ENST00000432287 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
SDHC-204ENST00000432287 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
SDHC-204ENST00000432287 WDR62O43379 1518 aa14.87□□□□□ -0.03
SDHC-204ENST00000432287 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
SDHC-204ENST00000432287 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
SDHC-204ENST00000432287 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
SDHC-204ENST00000432287 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
SDHC-204ENST00000432287 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
SDHC-204ENST00000432287 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
SDHC-204ENST00000432287 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
SDHC-204ENST00000432287 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
SDHC-204ENST00000432287 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
SDHC-204ENST00000432287 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SDHC-204ENST00000432287 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
SDHC-204ENST00000432287 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
SDHC-204ENST00000432287 WIZO95785 1651 aa14.56□□□□□ -0.08
SDHC-204ENST00000432287 CFTRP13569 1480 aa14.54□□□□□ -0.08
SDHC-204ENST00000432287 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
SDHC-204ENST00000432287 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
SDHC-204ENST00000432287 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
SDHC-204ENST00000432287 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
SDHC-204ENST00000432287 CHD1O14646 1710 aa14.39□□□□□ -0.11
SDHC-204ENST00000432287 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
SDHC-204ENST00000432287 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
SDHC-204ENST00000432287 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
SDHC-204ENST00000432287 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
SDHC-204ENST00000432287 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
SDHC-204ENST00000432287 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
SDHC-204ENST00000432287 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
SDHC-204ENST00000432287 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
SDHC-204ENST00000432287 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
SDHC-204ENST00000432287 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
SDHC-204ENST00000432287 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
SDHC-204ENST00000432287 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
SDHC-204ENST00000432287 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
SDHC-204ENST00000432287 FBLN2P98095 1184 aa14.14□□□□□ -0.15
SDHC-204ENST00000432287 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
SDHC-204ENST00000432287 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
SDHC-204ENST00000432287 SNAPC4Q5SXM2 1469 aa14.09□□□□□ -0.15
SDHC-204ENST00000432287 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
SDHC-204ENST00000432287 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
SDHC-204ENST00000432287 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
SDHC-204ENST00000432287 SYNJ1O43426 1573 aa14.03□□□□□ -0.16
SDHC-204ENST00000432287 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
SDHC-204ENST00000432287 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
SDHC-204ENST00000432287 SOGA1O94964 1423 aa13.99□□□□□ -0.17
SDHC-204ENST00000432287 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
SDHC-204ENST00000432287 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
SDHC-204ENST00000432287 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
SDHC-204ENST00000432287 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
SDHC-204ENST00000432287 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
SDHC-204ENST00000432287 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
SDHC-204ENST00000432287 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
SDHC-204ENST00000432287 CUX1P39880 1505 aa13.9□□□□□ -0.18
SDHC-204ENST00000432287 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
SDHC-204ENST00000432287 CEP170Q5SW79 1584 aa13.86□□□□□ -0.19
SDHC-204ENST00000432287 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
SDHC-204ENST00000432287 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
SDHC-204ENST00000432287 NUP160Q12769 1436 aa13.8□□□□□ -0.2
SDHC-204ENST00000432287 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
SDHC-204ENST00000432287 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
SDHC-204ENST00000432287 ABCC10Q5T3U5 1492 aa13.75□□□□□ -0.21
SDHC-204ENST00000432287 ADAMTS12P58397 1594 aa13.74□□□□□ -0.21
SDHC-204ENST00000432287 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
SDHC-204ENST00000432287 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
SDHC-204ENST00000432287 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
SDHC-204ENST00000432287 KDM6BO15054 1643 aa13.68□□□□□ -0.22
SDHC-204ENST00000432287 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms