RNA–Protein interactions for RNA: ENST00000431645.1

SRRT-202, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-202ENST00000431645 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
SRRT-202ENST00000431645 ABCC9O60706 1549 aa26.1■■□□□ 1.77
SRRT-202ENST00000431645 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
SRRT-202ENST00000431645 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
SRRT-202ENST00000431645 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
SRRT-202ENST00000431645 NACADO15069 1562 aa24.33■■□□□ 1.49
SRRT-202ENST00000431645 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
SRRT-202ENST00000431645 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
SRRT-202ENST00000431645 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
SRRT-202ENST00000431645 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
SRRT-202ENST00000431645 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
SRRT-202ENST00000431645 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
SRRT-202ENST00000431645 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
SRRT-202ENST00000431645 CC2D2AQ9P2K1 1620 aa23.53■■□□□ 1.36
SRRT-202ENST00000431645 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
SRRT-202ENST00000431645 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
SRRT-202ENST00000431645 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
SRRT-202ENST00000431645 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
SRRT-202ENST00000431645 DNAJC5Q9H3Z4 198 aa23.14■■□□□ 1.29
SRRT-202ENST00000431645 CUX2O14529 1486 aa22.69■■□□□ 1.22
SRRT-202ENST00000431645 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
SRRT-202ENST00000431645 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
SRRT-202ENST00000431645 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
SRRT-202ENST00000431645 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
SRRT-202ENST00000431645 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
SRRT-202ENST00000431645 NESP48681 1621 aa22.24■■□□□ 1.15
SRRT-202ENST00000431645 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
SRRT-202ENST00000431645 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
SRRT-202ENST00000431645 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
SRRT-202ENST00000431645 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
SRRT-202ENST00000431645 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
SRRT-202ENST00000431645 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
SRRT-202ENST00000431645 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
SRRT-202ENST00000431645 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SRRT-202ENST00000431645 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
SRRT-202ENST00000431645 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
SRRT-202ENST00000431645 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
SRRT-202ENST00000431645 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
SRRT-202ENST00000431645 WDR62O43379 1518 aa21.72■■□□□ 1.07
SRRT-202ENST00000431645 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
SRRT-202ENST00000431645 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
SRRT-202ENST00000431645 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
SRRT-202ENST00000431645 WIZO95785 1651 aa21.53■■□□□ 1.04
SRRT-202ENST00000431645 CFTRP13569 1480 aa21.38■■□□□ 1.01
SRRT-202ENST00000431645 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
SRRT-202ENST00000431645 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
SRRT-202ENST00000431645 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
SRRT-202ENST00000431645 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
SRRT-202ENST00000431645 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SRRT-202ENST00000431645 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
SRRT-202ENST00000431645 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
SRRT-202ENST00000431645 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
SRRT-202ENST00000431645 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
SRRT-202ENST00000431645 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
SRRT-202ENST00000431645 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
SRRT-202ENST00000431645 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
SRRT-202ENST00000431645 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
SRRT-202ENST00000431645 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
SRRT-202ENST00000431645 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
SRRT-202ENST00000431645 FBLN2P98095 1184 aa21.02■□□□□ 0.96
SRRT-202ENST00000431645 CHD1O14646 1710 aa21.01■□□□□ 0.95
SRRT-202ENST00000431645 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
SRRT-202ENST00000431645 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
SRRT-202ENST00000431645 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
SRRT-202ENST00000431645 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
SRRT-202ENST00000431645 AQRO60306 1485 aaKnown RBP eCLIP20.93■□□□□ 0.946e-10■■■■■ 26.9
SRRT-202ENST00000431645 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
SRRT-202ENST00000431645 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
SRRT-202ENST00000431645 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
SRRT-202ENST00000431645 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
SRRT-202ENST00000431645 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
SRRT-202ENST00000431645 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
SRRT-202ENST00000431645 SOGA1O94964 1423 aa20.73■□□□□ 0.91
SRRT-202ENST00000431645 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
SRRT-202ENST00000431645 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
SRRT-202ENST00000431645 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
SRRT-202ENST00000431645 MAGI1Q96QZ7 1491 aaPredicted RBP20.67■□□□□ 0.9
SRRT-202ENST00000431645 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
SRRT-202ENST00000431645 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
SRRT-202ENST00000431645 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
SRRT-202ENST00000431645 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
SRRT-202ENST00000431645 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
SRRT-202ENST00000431645 CUX1P39880 1505 aa20.49■□□□□ 0.87
SRRT-202ENST00000431645 ABCA5Q8WWZ7 1642 aa20.36■□□□□ 0.85
SRRT-202ENST00000431645 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
SRRT-202ENST00000431645 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
SRRT-202ENST00000431645 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
SRRT-202ENST00000431645 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
SRRT-202ENST00000431645 ADAMTS12P58397 1594 aa20.27■□□□□ 0.84
SRRT-202ENST00000431645 NUP160Q12769 1436 aa20.23■□□□□ 0.83
SRRT-202ENST00000431645 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
SRRT-202ENST00000431645 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
SRRT-202ENST00000431645 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
SRRT-202ENST00000431645 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
SRRT-202ENST00000431645 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
SRRT-202ENST00000431645 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
SRRT-202ENST00000431645 FAM69CQ0P6D2 419 aa20.13■□□□□ 0.81
SRRT-202ENST00000431645 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
SRRT-202ENST00000431645 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
SRRT-202ENST00000431645 ABCC10Q5T3U5 1492 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms