RNA–Protein interactions for RNA: ENST00000431542.1

AC116609.2-201, humanhuman

TSL 5 BASIC

Gene AC116609.2, Length 256 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116609.2-201ENST00000431542 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
AC116609.2-201ENST00000431542 ABCC9O60706 1549 aa32.16■■■□□ 2.74
AC116609.2-201ENST00000431542 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
AC116609.2-201ENST00000431542 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
AC116609.2-201ENST00000431542 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
AC116609.2-201ENST00000431542 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
AC116609.2-201ENST00000431542 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
AC116609.2-201ENST00000431542 NACADO15069 1562 aa29.46■■■□□ 2.31
AC116609.2-201ENST00000431542 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
AC116609.2-201ENST00000431542 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
AC116609.2-201ENST00000431542 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
AC116609.2-201ENST00000431542 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
AC116609.2-201ENST00000431542 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
AC116609.2-201ENST00000431542 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
AC116609.2-201ENST00000431542 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
AC116609.2-201ENST00000431542 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
AC116609.2-201ENST00000431542 CUX2O14529 1486 aa28.15■■■□□ 2.1
AC116609.2-201ENST00000431542 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
AC116609.2-201ENST00000431542 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
AC116609.2-201ENST00000431542 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
AC116609.2-201ENST00000431542 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
AC116609.2-201ENST00000431542 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
AC116609.2-201ENST00000431542 NESP48681 1621 aa27.27■■□□□ 1.96
AC116609.2-201ENST00000431542 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
AC116609.2-201ENST00000431542 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.93
AC116609.2-201ENST00000431542 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
AC116609.2-201ENST00000431542 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
AC116609.2-201ENST00000431542 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
AC116609.2-201ENST00000431542 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
AC116609.2-201ENST00000431542 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
AC116609.2-201ENST00000431542 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
AC116609.2-201ENST00000431542 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
AC116609.2-201ENST00000431542 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
AC116609.2-201ENST00000431542 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
AC116609.2-201ENST00000431542 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
AC116609.2-201ENST00000431542 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
AC116609.2-201ENST00000431542 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
AC116609.2-201ENST00000431542 WDR62O43379 1518 aa26.49■■□□□ 1.83
AC116609.2-201ENST00000431542 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
AC116609.2-201ENST00000431542 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
AC116609.2-201ENST00000431542 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
AC116609.2-201ENST00000431542 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
AC116609.2-201ENST00000431542 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
AC116609.2-201ENST00000431542 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
AC116609.2-201ENST00000431542 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
AC116609.2-201ENST00000431542 ARHGEF11O15085 1522 aa26.26■■□□□ 1.79
AC116609.2-201ENST00000431542 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
AC116609.2-201ENST00000431542 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
AC116609.2-201ENST00000431542 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
AC116609.2-201ENST00000431542 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
AC116609.2-201ENST00000431542 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
AC116609.2-201ENST00000431542 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
AC116609.2-201ENST00000431542 CFTRP13569 1480 aa25.79■■□□□ 1.72
AC116609.2-201ENST00000431542 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
AC116609.2-201ENST00000431542 WIZO95785 1651 aa25.7■■□□□ 1.7
AC116609.2-201ENST00000431542 FBLN2P98095 1184 aa25.68■■□□□ 1.7
AC116609.2-201ENST00000431542 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
AC116609.2-201ENST00000431542 CHD1O14646 1710 aa25.64■■□□□ 1.7
AC116609.2-201ENST00000431542 ILDR1Q86SU0 546 aaPredicted RBP25.6■■□□□ 1.69
AC116609.2-201ENST00000431542 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
AC116609.2-201ENST00000431542 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.67
AC116609.2-201ENST00000431542 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
AC116609.2-201ENST00000431542 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
AC116609.2-201ENST00000431542 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
AC116609.2-201ENST00000431542 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
AC116609.2-201ENST00000431542 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
AC116609.2-201ENST00000431542 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
AC116609.2-201ENST00000431542 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
AC116609.2-201ENST00000431542 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
AC116609.2-201ENST00000431542 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
AC116609.2-201ENST00000431542 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
AC116609.2-201ENST00000431542 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
AC116609.2-201ENST00000431542 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
AC116609.2-201ENST00000431542 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
AC116609.2-201ENST00000431542 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
AC116609.2-201ENST00000431542 KDM4FA0A1W2PPD8 638 aa25.06■■□□□ 1.6
AC116609.2-201ENST00000431542 SOGA1O94964 1423 aa25.03■■□□□ 1.6
AC116609.2-201ENST00000431542 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
AC116609.2-201ENST00000431542 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
AC116609.2-201ENST00000431542 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
AC116609.2-201ENST00000431542 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
AC116609.2-201ENST00000431542 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
AC116609.2-201ENST00000431542 ERCC6L2Q5T890 1561 aa24.87■■□□□ 1.57
AC116609.2-201ENST00000431542 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
AC116609.2-201ENST00000431542 FAM69CQ0P6D2 419 aa24.8■■□□□ 1.56
AC116609.2-201ENST00000431542 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
AC116609.2-201ENST00000431542 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
AC116609.2-201ENST00000431542 PBRM1Q86U86 1689 aa24.67■■□□□ 1.54
AC116609.2-201ENST00000431542 KDM6BO15054 1643 aa24.66■■□□□ 1.54
AC116609.2-201ENST00000431542 ABCC10Q5T3U5 1492 aa24.65■■□□□ 1.54
AC116609.2-201ENST00000431542 NPM1P06748 294 aaKnown RBP eCLIP24.59■■□□□ 1.53
AC116609.2-201ENST00000431542 GRIN2AQ12879 1464 aa24.57■■□□□ 1.52
AC116609.2-201ENST00000431542 CUX1P39880 1505 aa24.55■■□□□ 1.52
AC116609.2-201ENST00000431542 HECW2Q9P2P5 1572 aa24.54■■□□□ 1.52
AC116609.2-201ENST00000431542 FBXO41Q8TF61 875 aa24.54■■□□□ 1.52
AC116609.2-201ENST00000431542 NUP160Q12769 1436 aa24.52■■□□□ 1.52
AC116609.2-201ENST00000431542 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
AC116609.2-201ENST00000431542 DIP2BQ9P265 1576 aa24.5■■□□□ 1.51
AC116609.2-201ENST00000431542 ADGRL1O94910 1474 aa24.49■■□□□ 1.51
AC116609.2-201ENST00000431542 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms