RNA–Protein interactions for RNA: ENST00000429614.5

CCDC162P-204, Transcript of coiled-coil domain containing 162, pseudogene, humanhuman

TSL 1 (best)

Gene CCDC162P, Length 715 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162P-204ENST00000429614 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
CCDC162P-204ENST00000429614 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CCDC162P-204ENST00000429614 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
CCDC162P-204ENST00000429614 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
CCDC162P-204ENST00000429614 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
CCDC162P-204ENST00000429614 FOXD1Q16676 465 aa16.91■□□□□ 0.3
CCDC162P-204ENST00000429614 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
CCDC162P-204ENST00000429614 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CCDC162P-204ENST00000429614 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CCDC162P-204ENST00000429614 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
CCDC162P-204ENST00000429614 MSH5O43196 834 aa15.82■□□□□ 0.12
CCDC162P-204ENST00000429614 ABCC9O60706 1549 aa15.71■□□□□ 0.11
CCDC162P-204ENST00000429614 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
CCDC162P-204ENST00000429614 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
CCDC162P-204ENST00000429614 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
CCDC162P-204ENST00000429614 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
CCDC162P-204ENST00000429614 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
CCDC162P-204ENST00000429614 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC162P-204ENST00000429614 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
CCDC162P-204ENST00000429614 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
CCDC162P-204ENST00000429614 NACADO15069 1562 aa14.56□□□□□ -0.08
CCDC162P-204ENST00000429614 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
CCDC162P-204ENST00000429614 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
CCDC162P-204ENST00000429614 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
CCDC162P-204ENST00000429614 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
CCDC162P-204ENST00000429614 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
CCDC162P-204ENST00000429614 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
CCDC162P-204ENST00000429614 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
CCDC162P-204ENST00000429614 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
CCDC162P-204ENST00000429614 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
CCDC162P-204ENST00000429614 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
CCDC162P-204ENST00000429614 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
CCDC162P-204ENST00000429614 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
CCDC162P-204ENST00000429614 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CCDC162P-204ENST00000429614 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
CCDC162P-204ENST00000429614 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
CCDC162P-204ENST00000429614 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
CCDC162P-204ENST00000429614 KCNA4P22459 653 aa13.56□□□□□ -0.24
CCDC162P-204ENST00000429614 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
CCDC162P-204ENST00000429614 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
CCDC162P-204ENST00000429614 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
CCDC162P-204ENST00000429614 NESP48681 1621 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 CUX2O14529 1486 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
CCDC162P-204ENST00000429614 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
CCDC162P-204ENST00000429614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.276e-6■□□□□ 8.2
CCDC162P-204ENST00000429614 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
CCDC162P-204ENST00000429614 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
CCDC162P-204ENST00000429614 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CCDC162P-204ENST00000429614 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
CCDC162P-204ENST00000429614 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
CCDC162P-204ENST00000429614 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CCDC162P-204ENST00000429614 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
CCDC162P-204ENST00000429614 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
CCDC162P-204ENST00000429614 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
CCDC162P-204ENST00000429614 LAMC3Q9Y6N6 1575 aa13.18□□□□□ -0.3
CCDC162P-204ENST00000429614 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
CCDC162P-204ENST00000429614 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
CCDC162P-204ENST00000429614 WIZO95785 1651 aa13.11□□□□□ -0.31
CCDC162P-204ENST00000429614 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
CCDC162P-204ENST00000429614 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
CCDC162P-204ENST00000429614 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
CCDC162P-204ENST00000429614 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
CCDC162P-204ENST00000429614 WDR62O43379 1518 aa12.98□□□□□ -0.33
CCDC162P-204ENST00000429614 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
CCDC162P-204ENST00000429614 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
CCDC162P-204ENST00000429614 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
CCDC162P-204ENST00000429614 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
CCDC162P-204ENST00000429614 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CCDC162P-204ENST00000429614 CFTRP13569 1480 aa12.85□□□□□ -0.35
CCDC162P-204ENST00000429614 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
CCDC162P-204ENST00000429614 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CCDC162P-204ENST00000429614 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
CCDC162P-204ENST00000429614 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
CCDC162P-204ENST00000429614 APLP2Q06481 763 aa12.78□□□□□ -0.36
CCDC162P-204ENST00000429614 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
CCDC162P-204ENST00000429614 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
CCDC162P-204ENST00000429614 CHD1O14646 1710 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 DSG3P32926 999 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 FBLN2P98095 1184 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms