RNA–Protein interactions for RNA: ENST00000429037.2

HLA-V-201, Transcript of major histocompatibility complex, class I, V (pseudogene), humanhuman

BASIC

Gene HLA-V, Length 534 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-V-201ENST00000429037 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
HLA-V-201ENST00000429037 ABCC9O60706 1549 aa36.71■■■■□ 3.47
HLA-V-201ENST00000429037 CCDC180Q9P1Z9 1646 aa35.71■■■■□ 3.31
HLA-V-201ENST00000429037 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
HLA-V-201ENST00000429037 RB1CC1Q8TDY2 1594 aa34.49■■■■□ 3.11
HLA-V-201ENST00000429037 NACADO15069 1562 aa34.01■■■■□ 3.03
HLA-V-201ENST00000429037 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
HLA-V-201ENST00000429037 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
HLA-V-201ENST00000429037 BICRAQ9NZM4 1560 aa33.57■■■□□ 2.96
HLA-V-201ENST00000429037 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
HLA-V-201ENST00000429037 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
HLA-V-201ENST00000429037 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
HLA-V-201ENST00000429037 CECR2Q9BXF3 1484 aa33.2■■■□□ 2.91
HLA-V-201ENST00000429037 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
HLA-V-201ENST00000429037 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
HLA-V-201ENST00000429037 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
HLA-V-201ENST00000429037 SCRIBQ14160 1630 aa32.42■■■□□ 2.78
HLA-V-201ENST00000429037 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
HLA-V-201ENST00000429037 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
HLA-V-201ENST00000429037 CUX2O14529 1486 aa32.13■■■□□ 2.73
HLA-V-201ENST00000429037 ERCC6Q03468 1493 aa31.76■■■□□ 2.67
HLA-V-201ENST00000429037 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
HLA-V-201ENST00000429037 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
HLA-V-201ENST00000429037 NESP48681 1621 aa31.25■■■□□ 2.59
HLA-V-201ENST00000429037 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
HLA-V-201ENST00000429037 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
HLA-V-201ENST00000429037 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
HLA-V-201ENST00000429037 SMARCA2P51531 1590 aa31■■■□□ 2.55
HLA-V-201ENST00000429037 LAMC3Q9Y6N6 1575 aa30.87■■■□□ 2.53
HLA-V-201ENST00000429037 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
HLA-V-201ENST00000429037 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
HLA-V-201ENST00000429037 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.52
HLA-V-201ENST00000429037 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
HLA-V-201ENST00000429037 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
HLA-V-201ENST00000429037 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
HLA-V-201ENST00000429037 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.48
HLA-V-201ENST00000429037 WDR62O43379 1518 aa30.5■■■□□ 2.47
HLA-V-201ENST00000429037 OSCARQ8IYS5 282 aa30.45■■■□□ 2.47
HLA-V-201ENST00000429037 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.45
HLA-V-201ENST00000429037 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
HLA-V-201ENST00000429037 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
HLA-V-201ENST00000429037 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
HLA-V-201ENST00000429037 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
HLA-V-201ENST00000429037 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
HLA-V-201ENST00000429037 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
HLA-V-201ENST00000429037 ARHGEF11O15085 1522 aa29.98■■■□□ 2.39
HLA-V-201ENST00000429037 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
HLA-V-201ENST00000429037 CFTRP13569 1480 aa29.82■■■□□ 2.36
HLA-V-201ENST00000429037 WIZO95785 1651 aa29.8■■■□□ 2.36
HLA-V-201ENST00000429037 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
HLA-V-201ENST00000429037 TRHP20396 242 aaPredicted RBP29.79■■■□□ 2.36
HLA-V-201ENST00000429037 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
HLA-V-201ENST00000429037 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
HLA-V-201ENST00000429037 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
HLA-V-201ENST00000429037 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
HLA-V-201ENST00000429037 CHD1O14646 1710 aa29.47■■■□□ 2.31
HLA-V-201ENST00000429037 PRDM2Q13029 1718 aa29.46■■■□□ 2.31
HLA-V-201ENST00000429037 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
HLA-V-201ENST00000429037 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
HLA-V-201ENST00000429037 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
HLA-V-201ENST00000429037 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
HLA-V-201ENST00000429037 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
HLA-V-201ENST00000429037 FBLN2P98095 1184 aa29.23■■■□□ 2.27
HLA-V-201ENST00000429037 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
HLA-V-201ENST00000429037 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.27
HLA-V-201ENST00000429037 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
HLA-V-201ENST00000429037 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
HLA-V-201ENST00000429037 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
HLA-V-201ENST00000429037 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
HLA-V-201ENST00000429037 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
HLA-V-201ENST00000429037 SNAPC4Q5SXM2 1469 aa28.92■■■□□ 2.22
HLA-V-201ENST00000429037 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
HLA-V-201ENST00000429037 RAD54L2Q9Y4B4 1467 aa28.89■■■□□ 2.22
HLA-V-201ENST00000429037 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
HLA-V-201ENST00000429037 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
HLA-V-201ENST00000429037 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
HLA-V-201ENST00000429037 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
HLA-V-201ENST00000429037 SOGA1O94964 1423 aa28.81■■■□□ 2.2
HLA-V-201ENST00000429037 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
HLA-V-201ENST00000429037 GRIN2BQ13224 1484 aa28.7■■■□□ 2.18
HLA-V-201ENST00000429037 ILDR1Q86SU0 546 aaPredicted RBP28.64■■■□□ 2.18
HLA-V-201ENST00000429037 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
HLA-V-201ENST00000429037 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
HLA-V-201ENST00000429037 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
HLA-V-201ENST00000429037 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
HLA-V-201ENST00000429037 CUX1P39880 1505 aa28.45■■■□□ 2.15
HLA-V-201ENST00000429037 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
HLA-V-201ENST00000429037 KDM4FA0A1W2PPD8 638 aa28.39■■■□□ 2.14
HLA-V-201ENST00000429037 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
HLA-V-201ENST00000429037 ABCA5Q8WWZ7 1642 aa28.33■■■□□ 2.13
HLA-V-201ENST00000429037 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
HLA-V-201ENST00000429037 NUP160Q12769 1436 aa28.3■■■□□ 2.12
HLA-V-201ENST00000429037 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
HLA-V-201ENST00000429037 ABCC10Q5T3U5 1492 aa28.24■■■□□ 2.11
HLA-V-201ENST00000429037 FAM69CQ0P6D2 419 aa28.22■■■□□ 2.11
HLA-V-201ENST00000429037 ADAMTS12P58397 1594 aa28.19■■■□□ 2.1
HLA-V-201ENST00000429037 KDM6BO15054 1643 aa28.16■■■□□ 2.1
HLA-V-201ENST00000429037 DIP2BQ9P265 1576 aa28.14■■■□□ 2.1
HLA-V-201ENST00000429037 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
HLA-V-201ENST00000429037 PRG4Q92954 1404 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms