RNA–Protein interactions for RNA: ENST00000428370.1

AC006001.3-205, humanhuman

BASIC

Gene AC006001.3, Length 579 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-205ENST00000428370 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
AC006001.3-205ENST00000428370 ABCC9O60706 1549 aa27.05■■□□□ 1.92
AC006001.3-205ENST00000428370 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
AC006001.3-205ENST00000428370 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
AC006001.3-205ENST00000428370 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
AC006001.3-205ENST00000428370 NACADO15069 1562 aa25.11■■□□□ 1.61
AC006001.3-205ENST00000428370 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
AC006001.3-205ENST00000428370 UNC13AQ9UPW8 1703 aa24.97■■□□□ 1.59
AC006001.3-205ENST00000428370 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
AC006001.3-205ENST00000428370 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
AC006001.3-205ENST00000428370 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
AC006001.3-205ENST00000428370 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
AC006001.3-205ENST00000428370 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
AC006001.3-205ENST00000428370 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
AC006001.3-205ENST00000428370 EIF4G1Q04637 1599 aaKnown RBP24.19■■□□□ 1.46
AC006001.3-205ENST00000428370 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
AC006001.3-205ENST00000428370 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
AC006001.3-205ENST00000428370 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
AC006001.3-205ENST00000428370 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
AC006001.3-205ENST00000428370 CUX2O14529 1486 aa23.51■■□□□ 1.35
AC006001.3-205ENST00000428370 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
AC006001.3-205ENST00000428370 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
AC006001.3-205ENST00000428370 NESP48681 1621 aa23.07■■□□□ 1.28
AC006001.3-205ENST00000428370 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
AC006001.3-205ENST00000428370 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
AC006001.3-205ENST00000428370 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
AC006001.3-205ENST00000428370 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
AC006001.3-205ENST00000428370 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
AC006001.3-205ENST00000428370 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
AC006001.3-205ENST00000428370 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
AC006001.3-205ENST00000428370 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
AC006001.3-205ENST00000428370 LAMC3Q9Y6N6 1575 aa22.78■■□□□ 1.24
AC006001.3-205ENST00000428370 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
AC006001.3-205ENST00000428370 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
AC006001.3-205ENST00000428370 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
AC006001.3-205ENST00000428370 MRC2Q9UBG0 1479 aa22.51■■□□□ 1.19
AC006001.3-205ENST00000428370 WDR62O43379 1518 aa22.48■■□□□ 1.19
AC006001.3-205ENST00000428370 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
AC006001.3-205ENST00000428370 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
AC006001.3-205ENST00000428370 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
AC006001.3-205ENST00000428370 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
AC006001.3-205ENST00000428370 WIZO95785 1651 aa22.22■■□□□ 1.15
AC006001.3-205ENST00000428370 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
AC006001.3-205ENST00000428370 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
AC006001.3-205ENST00000428370 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
AC006001.3-205ENST00000428370 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
AC006001.3-205ENST00000428370 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
AC006001.3-205ENST00000428370 CFTRP13569 1480 aa22.06■■□□□ 1.12
AC006001.3-205ENST00000428370 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
AC006001.3-205ENST00000428370 ZNF608Q9ULD9 1512 aaPredicted RBP21.91■■□□□ 1.1
AC006001.3-205ENST00000428370 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
AC006001.3-205ENST00000428370 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
AC006001.3-205ENST00000428370 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
AC006001.3-205ENST00000428370 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
AC006001.3-205ENST00000428370 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
AC006001.3-205ENST00000428370 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
AC006001.3-205ENST00000428370 CHD1O14646 1710 aa21.78■■□□□ 1.08
AC006001.3-205ENST00000428370 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
AC006001.3-205ENST00000428370 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
AC006001.3-205ENST00000428370 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
AC006001.3-205ENST00000428370 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
AC006001.3-205ENST00000428370 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
AC006001.3-205ENST00000428370 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
AC006001.3-205ENST00000428370 FBLN2P98095 1184 aa21.61■■□□□ 1.05
AC006001.3-205ENST00000428370 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
AC006001.3-205ENST00000428370 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
AC006001.3-205ENST00000428370 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
AC006001.3-205ENST00000428370 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
AC006001.3-205ENST00000428370 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
AC006001.3-205ENST00000428370 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
AC006001.3-205ENST00000428370 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
AC006001.3-205ENST00000428370 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
AC006001.3-205ENST00000428370 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
AC006001.3-205ENST00000428370 SOGA1O94964 1423 aa21.35■■□□□ 1.01
AC006001.3-205ENST00000428370 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
AC006001.3-205ENST00000428370 WDR97A6NE52 1622 aa21.3■■□□□ 1
AC006001.3-205ENST00000428370 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
AC006001.3-205ENST00000428370 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
AC006001.3-205ENST00000428370 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
AC006001.3-205ENST00000428370 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
AC006001.3-205ENST00000428370 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
AC006001.3-205ENST00000428370 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
AC006001.3-205ENST00000428370 CUX1P39880 1505 aa21.15■□□□□ 0.98
AC006001.3-205ENST00000428370 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
AC006001.3-205ENST00000428370 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
AC006001.3-205ENST00000428370 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
AC006001.3-205ENST00000428370 CEP170Q5SW79 1584 aa21■□□□□ 0.95
AC006001.3-205ENST00000428370 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
AC006001.3-205ENST00000428370 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
AC006001.3-205ENST00000428370 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
AC006001.3-205ENST00000428370 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
AC006001.3-205ENST00000428370 NUP160Q12769 1436 aa20.9■□□□□ 0.94
AC006001.3-205ENST00000428370 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
AC006001.3-205ENST00000428370 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
AC006001.3-205ENST00000428370 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
AC006001.3-205ENST00000428370 ABCC10Q5T3U5 1492 aa20.76■□□□□ 0.91
AC006001.3-205ENST00000428370 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AC006001.3-205ENST00000428370 ILDR1Q86SU0 546 aaPredicted RBP20.74■□□□□ 0.91
AC006001.3-205ENST00000428370 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
AC006001.3-205ENST00000428370 KDM6BO15054 1643 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms