RNA–Protein interactions for RNA: ENST00000427716.6

FGD4-202, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FGD4, Length 8,242 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-202ENST00000427716 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
FGD4-202ENST00000427716 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
FGD4-202ENST00000427716 MYT1Q01538 1121 aa12.29□□□□□ -0.44
FGD4-202ENST00000427716 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
FGD4-202ENST00000427716 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
FGD4-202ENST00000427716 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
FGD4-202ENST00000427716 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
FGD4-202ENST00000427716 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
FGD4-202ENST00000427716 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
FGD4-202ENST00000427716 APLP2Q06481 763 aa11.75□□□□□ -0.53
FGD4-202ENST00000427716 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
FGD4-202ENST00000427716 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
FGD4-202ENST00000427716 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
FGD4-202ENST00000427716 HRCP23327 699 aa11.64□□□□□ -0.55
FGD4-202ENST00000427716 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
FGD4-202ENST00000427716 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
FGD4-202ENST00000427716 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
FGD4-202ENST00000427716 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
FGD4-202ENST00000427716 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
FGD4-202ENST00000427716 NEFLP07196 543 aa11.36□□□□□ -0.59
FGD4-202ENST00000427716 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
FGD4-202ENST00000427716 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
FGD4-202ENST00000427716 TTBK1Q5TCY1 1321 aaPredicted RBP11.31□□□□□ -0.6
FGD4-202ENST00000427716 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
FGD4-202ENST00000427716 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
FGD4-202ENST00000427716 NACADO15069 1562 aa11.12□□□□□ -0.63
FGD4-202ENST00000427716 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
FGD4-202ENST00000427716 EEA1Q15075 1411 aa11.07□□□□□ -0.64
FGD4-202ENST00000427716 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
FGD4-202ENST00000427716 SCRIBQ14160 1630 aa11.04□□□□□ -0.64
FGD4-202ENST00000427716 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
FGD4-202ENST00000427716 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
FGD4-202ENST00000427716 ABCC9O60706 1549 aa11.02□□□□□ -0.65
FGD4-202ENST00000427716 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
FGD4-202ENST00000427716 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
FGD4-202ENST00000427716 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
FGD4-202ENST00000427716 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
FGD4-202ENST00000427716 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
FGD4-202ENST00000427716 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
FGD4-202ENST00000427716 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
FGD4-202ENST00000427716 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
FGD4-202ENST00000427716 ANP32CO43423 234 aa10.78□□□□□ -0.68
FGD4-202ENST00000427716 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.69
FGD4-202ENST00000427716 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
FGD4-202ENST00000427716 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
FGD4-202ENST00000427716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
FGD4-202ENST00000427716 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
FGD4-202ENST00000427716 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
FGD4-202ENST00000427716 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
FGD4-202ENST00000427716 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
FGD4-202ENST00000427716 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
FGD4-202ENST00000427716 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
FGD4-202ENST00000427716 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
FGD4-202ENST00000427716 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
FGD4-202ENST00000427716 CEP162Q5TB80 1403 aa10.62□□□□□ -0.71
FGD4-202ENST00000427716 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
FGD4-202ENST00000427716 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
FGD4-202ENST00000427716 CLIP1P30622 1438 aa10.61□□□□□ -0.71
FGD4-202ENST00000427716 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
FGD4-202ENST00000427716 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
FGD4-202ENST00000427716 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
FGD4-202ENST00000427716 TONSLQ96HA7 1378 aa10.55□□□□□ -0.72
FGD4-202ENST00000427716 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
FGD4-202ENST00000427716 FHAD1B1AJZ9 1412 aa10.53□□□□□ -0.72
FGD4-202ENST00000427716 ITGAEP38570 1179 aa10.51□□□□□ -0.73
FGD4-202ENST00000427716 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
FGD4-202ENST00000427716 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
FGD4-202ENST00000427716 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
FGD4-202ENST00000427716 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
FGD4-202ENST00000427716 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
FGD4-202ENST00000427716 WIZO95785 1651 aa10.47□□□□□ -0.73
FGD4-202ENST00000427716 KIF21BO75037 1637 aa10.46□□□□□ -0.73
FGD4-202ENST00000427716 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.74
FGD4-202ENST00000427716 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
FGD4-202ENST00000427716 VPS8Q8N3P4 1428 aa10.45□□□□□ -0.74
FGD4-202ENST00000427716 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
FGD4-202ENST00000427716 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
FGD4-202ENST00000427716 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
FGD4-202ENST00000427716 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
FGD4-202ENST00000427716 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
FGD4-202ENST00000427716 SLC24A1O60721 1099 aa10.37□□□□□ -0.75
FGD4-202ENST00000427716 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
FGD4-202ENST00000427716 CCER2I3L3R5 266 aa10.37□□□□□ -0.75
FGD4-202ENST00000427716 MROH2BQ7Z745 1585 aa10.36□□□□□ -0.75
FGD4-202ENST00000427716 ARID4BQ4LE39 1312 aaPredicted RBP10.35□□□□□ -0.75
FGD4-202ENST00000427716 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
FGD4-202ENST00000427716 FKBP8Q14318 412 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
FGD4-202ENST00000427716 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 NEFMP07197 916 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 POLR3GLQ9BT43 218 aa10.33□□□□□ -0.76
FGD4-202ENST00000427716 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
FGD4-202ENST00000427716 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
FGD4-202ENST00000427716 CUX1P39880 1505 aa10.29□□□□□ -0.76
FGD4-202ENST00000427716 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
FGD4-202ENST00000427716 SETD5Q9C0A6 1442 aa10.28□□□□□ -0.76
FGD4-202ENST00000427716 FMN1Q68DA7 1419 aa10.27□□□□□ -0.76
FGD4-202ENST00000427716 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms