RNA–Protein interactions for RNA: ENST00000424898.2

PDZD9-201, Transcript of PDZ domain containing 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZD9, Length 1,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-201ENST00000424898 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
PDZD9-201ENST00000424898 ABCC9O60706 1549 aa27.46■■□□□ 1.99
PDZD9-201ENST00000424898 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
PDZD9-201ENST00000424898 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
PDZD9-201ENST00000424898 DNAJC5BQ9UF47 199 aa26.36■■□□□ 1.81
PDZD9-201ENST00000424898 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
PDZD9-201ENST00000424898 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
PDZD9-201ENST00000424898 NACADO15069 1562 aa25.43■■□□□ 1.66
PDZD9-201ENST00000424898 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
PDZD9-201ENST00000424898 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
PDZD9-201ENST00000424898 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
PDZD9-201ENST00000424898 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
PDZD9-201ENST00000424898 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
PDZD9-201ENST00000424898 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
PDZD9-201ENST00000424898 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
PDZD9-201ENST00000424898 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
PDZD9-201ENST00000424898 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
PDZD9-201ENST00000424898 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
PDZD9-201ENST00000424898 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
PDZD9-201ENST00000424898 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
PDZD9-201ENST00000424898 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PDZD9-201ENST00000424898 CUX2O14529 1486 aa23.88■■□□□ 1.41
PDZD9-201ENST00000424898 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
PDZD9-201ENST00000424898 NCAPD3P42695 1498 aa23.5■■□□□ 1.35
PDZD9-201ENST00000424898 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
PDZD9-201ENST00000424898 NESP48681 1621 aa23.37■■□□□ 1.33
PDZD9-201ENST00000424898 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
PDZD9-201ENST00000424898 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
PDZD9-201ENST00000424898 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
PDZD9-201ENST00000424898 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
PDZD9-201ENST00000424898 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
PDZD9-201ENST00000424898 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
PDZD9-201ENST00000424898 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
PDZD9-201ENST00000424898 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
PDZD9-201ENST00000424898 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
PDZD9-201ENST00000424898 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
PDZD9-201ENST00000424898 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
PDZD9-201ENST00000424898 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
PDZD9-201ENST00000424898 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
PDZD9-201ENST00000424898 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
PDZD9-201ENST00000424898 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
PDZD9-201ENST00000424898 CADPSQ9ULU8 1353 aa22.79■■□□□ 1.24
PDZD9-201ENST00000424898 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
PDZD9-201ENST00000424898 WDR62O43379 1518 aa22.75■■□□□ 1.23
PDZD9-201ENST00000424898 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
PDZD9-201ENST00000424898 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
PDZD9-201ENST00000424898 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
PDZD9-201ENST00000424898 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
PDZD9-201ENST00000424898 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
PDZD9-201ENST00000424898 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
PDZD9-201ENST00000424898 WIZO95785 1651 aa22.4■■□□□ 1.18
PDZD9-201ENST00000424898 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
PDZD9-201ENST00000424898 CFTRP13569 1480 aa22.35■■□□□ 1.17
PDZD9-201ENST00000424898 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
PDZD9-201ENST00000424898 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
PDZD9-201ENST00000424898 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
PDZD9-201ENST00000424898 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
PDZD9-201ENST00000424898 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
PDZD9-201ENST00000424898 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
PDZD9-201ENST00000424898 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
PDZD9-201ENST00000424898 FBLN2P98095 1184 aa22.06■■□□□ 1.12
PDZD9-201ENST00000424898 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
PDZD9-201ENST00000424898 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
PDZD9-201ENST00000424898 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
PDZD9-201ENST00000424898 FOXD1Q16676 465 aa21.98■■□□□ 1.11
PDZD9-201ENST00000424898 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
PDZD9-201ENST00000424898 CHD1O14646 1710 aa21.97■■□□□ 1.11
PDZD9-201ENST00000424898 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.11
PDZD9-201ENST00000424898 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
PDZD9-201ENST00000424898 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
PDZD9-201ENST00000424898 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
PDZD9-201ENST00000424898 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
PDZD9-201ENST00000424898 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
PDZD9-201ENST00000424898 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
PDZD9-201ENST00000424898 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
PDZD9-201ENST00000424898 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
PDZD9-201ENST00000424898 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
PDZD9-201ENST00000424898 SOGA1O94964 1423 aa21.69■■□□□ 1.06
PDZD9-201ENST00000424898 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
PDZD9-201ENST00000424898 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
PDZD9-201ENST00000424898 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
PDZD9-201ENST00000424898 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
PDZD9-201ENST00000424898 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
PDZD9-201ENST00000424898 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
PDZD9-201ENST00000424898 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
PDZD9-201ENST00000424898 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
PDZD9-201ENST00000424898 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
PDZD9-201ENST00000424898 CUX1P39880 1505 aa21.38■■□□□ 1.01
PDZD9-201ENST00000424898 ERCC6L2Q5T890 1561 aa21.35■■□□□ 1.01
PDZD9-201ENST00000424898 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
PDZD9-201ENST00000424898 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
PDZD9-201ENST00000424898 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
PDZD9-201ENST00000424898 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
PDZD9-201ENST00000424898 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
PDZD9-201ENST00000424898 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
PDZD9-201ENST00000424898 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
PDZD9-201ENST00000424898 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
PDZD9-201ENST00000424898 NUP160Q12769 1436 aa21.19■□□□□ 0.98
PDZD9-201ENST00000424898 MSH5O43196 834 aa21.17■□□□□ 0.98
PDZD9-201ENST00000424898 KDM4FA0A1W2PPD8 638 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms