RNA–Protein interactions for RNA: ENST00000424754.5

NCSTN-205, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-205ENST00000424754 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
NCSTN-205ENST00000424754 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
NCSTN-205ENST00000424754 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
NCSTN-205ENST00000424754 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
NCSTN-205ENST00000424754 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
NCSTN-205ENST00000424754 ABCC9O60706 1549 aa19.55■□□□□ 0.72
NCSTN-205ENST00000424754 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
NCSTN-205ENST00000424754 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
NCSTN-205ENST00000424754 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
NCSTN-205ENST00000424754 NACADO15069 1562 aa18.74■□□□□ 0.59
NCSTN-205ENST00000424754 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
NCSTN-205ENST00000424754 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
NCSTN-205ENST00000424754 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
NCSTN-205ENST00000424754 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
NCSTN-205ENST00000424754 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
NCSTN-205ENST00000424754 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
NCSTN-205ENST00000424754 FOXD1Q16676 465 aa18.13■□□□□ 0.49
NCSTN-205ENST00000424754 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
NCSTN-205ENST00000424754 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
NCSTN-205ENST00000424754 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
NCSTN-205ENST00000424754 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
NCSTN-205ENST00000424754 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
NCSTN-205ENST00000424754 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
NCSTN-205ENST00000424754 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
NCSTN-205ENST00000424754 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
NCSTN-205ENST00000424754 SMARCA4P51532 1647 aa17.33■□□□□ 0.37
NCSTN-205ENST00000424754 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
NCSTN-205ENST00000424754 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
NCSTN-205ENST00000424754 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
NCSTN-205ENST00000424754 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
NCSTN-205ENST00000424754 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
NCSTN-205ENST00000424754 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
NCSTN-205ENST00000424754 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
NCSTN-205ENST00000424754 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
NCSTN-205ENST00000424754 MSH5O43196 834 aa17.08■□□□□ 0.32
NCSTN-205ENST00000424754 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
NCSTN-205ENST00000424754 WIZO95785 1651 aa17.01■□□□□ 0.31
NCSTN-205ENST00000424754 ADRA2BP18089 450 aa17.01■□□□□ 0.31
NCSTN-205ENST00000424754 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
NCSTN-205ENST00000424754 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
NCSTN-205ENST00000424754 NESP48681 1621 aa16.86■□□□□ 0.29
NCSTN-205ENST00000424754 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
NCSTN-205ENST00000424754 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
NCSTN-205ENST00000424754 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
NCSTN-205ENST00000424754 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
NCSTN-205ENST00000424754 CUX2O14529 1486 aa16.7■□□□□ 0.26
NCSTN-205ENST00000424754 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
NCSTN-205ENST00000424754 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
NCSTN-205ENST00000424754 CFTRP13569 1480 aa16.67■□□□□ 0.26
NCSTN-205ENST00000424754 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
NCSTN-205ENST00000424754 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
NCSTN-205ENST00000424754 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
NCSTN-205ENST00000424754 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
NCSTN-205ENST00000424754 THOC2Q8NI27 1593 aaKnown RBP16.56■□□□□ 0.24
NCSTN-205ENST00000424754 WDR62O43379 1518 aa16.47■□□□□ 0.23
NCSTN-205ENST00000424754 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
NCSTN-205ENST00000424754 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
NCSTN-205ENST00000424754 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
NCSTN-205ENST00000424754 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
NCSTN-205ENST00000424754 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
NCSTN-205ENST00000424754 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
NCSTN-205ENST00000424754 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
NCSTN-205ENST00000424754 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
NCSTN-205ENST00000424754 SOGA1O94964 1423 aa16.18■□□□□ 0.18
NCSTN-205ENST00000424754 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
NCSTN-205ENST00000424754 CUX1P39880 1505 aa16.14■□□□□ 0.18
NCSTN-205ENST00000424754 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
NCSTN-205ENST00000424754 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
NCSTN-205ENST00000424754 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
NCSTN-205ENST00000424754 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
NCSTN-205ENST00000424754 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
NCSTN-205ENST00000424754 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■■■■□ 19.3
NCSTN-205ENST00000424754 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.17
NCSTN-205ENST00000424754 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
NCSTN-205ENST00000424754 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
NCSTN-205ENST00000424754 FBLN2P98095 1184 aa16.03■□□□□ 0.16
NCSTN-205ENST00000424754 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
NCSTN-205ENST00000424754 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
NCSTN-205ENST00000424754 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
NCSTN-205ENST00000424754 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
NCSTN-205ENST00000424754 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
NCSTN-205ENST00000424754 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
NCSTN-205ENST00000424754 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
NCSTN-205ENST00000424754 GAPVD1Q14C86 1478 aa15.96■□□□□ 0.14
NCSTN-205ENST00000424754 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
NCSTN-205ENST00000424754 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
NCSTN-205ENST00000424754 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
NCSTN-205ENST00000424754 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
NCSTN-205ENST00000424754 CHD1O14646 1710 aa15.85■□□□□ 0.13
NCSTN-205ENST00000424754 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
NCSTN-205ENST00000424754 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
NCSTN-205ENST00000424754 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
NCSTN-205ENST00000424754 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
NCSTN-205ENST00000424754 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
NCSTN-205ENST00000424754 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
NCSTN-205ENST00000424754 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
NCSTN-205ENST00000424754 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
NCSTN-205ENST00000424754 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
NCSTN-205ENST00000424754 RIMBP3CA6NJZ7 1639 aa15.7■□□□□ 0.1
NCSTN-205ENST00000424754 RIMBP3BA6NNM3 1639 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms