RNA–Protein interactions for RNA: ENST00000419673.6

ARHGAP28-204, Transcript of Rho GTPase activating protein 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ARHGAP28, Length 5,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-204ENST00000419673 NISCHQ9Y2I1 1504 aa6.65□□□□□ -1.35
ARHGAP28-204ENST00000419673 CCDC180Q9P1Z9 1646 aa6.28□□□□□ -1.4
ARHGAP28-204ENST00000419673 ABCC9O60706 1549 aa6.19□□□□□ -1.42
ARHGAP28-204ENST00000419673 RB1CC1Q8TDY2 1594 aa6.09□□□□□ -1.44
ARHGAP28-204ENST00000419673 SHROOM4Q9ULL8 1493 aa5.99□□□□□ -1.45
ARHGAP28-204ENST00000419673 NACADO15069 1562 aa5.98□□□□□ -1.45
ARHGAP28-204ENST00000419673 MYO15BQ96JP2 1530 aa5.85□□□□□ -1.47
ARHGAP28-204ENST00000419673 DNAJC5Q9H3Z4 198 aa5.79□□□□□ -1.48
ARHGAP28-204ENST00000419673 CUX2O14529 1486 aa5.75□□□□□ -1.49
ARHGAP28-204ENST00000419673 DNAJC5BQ9UF47 199 aa5.74□□□□□ -1.49
ARHGAP28-204ENST00000419673 CECR2Q9BXF3 1484 aa5.72□□□□□ -1.49
ARHGAP28-204ENST00000419673 CC2D2AQ9P2K1 1620 aa5.65□□□□□ -1.5
ARHGAP28-204ENST00000419673 DCAF1Q9Y4B6 1507 aa5.64□□□□□ -1.51
ARHGAP28-204ENST00000419673 PABPN1Q86U42 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
ARHGAP28-204ENST00000419673 UNC13AQ9UPW8 1703 aa5.62□□□□□ -1.51
ARHGAP28-204ENST00000419673 DCAF8L2P0C7V8 631 aa5.61□□□□□ -1.51
ARHGAP28-204ENST00000419673 ERCC6Q03468 1493 aa5.6□□□□□ -1.51
ARHGAP28-204ENST00000419673 EIF4G1Q04637 1599 aaKnown RBP5.59□□□□□ -1.51
ARHGAP28-204ENST00000419673 BICRAQ9NZM4 1560 aa5.59□□□□□ -1.52
ARHGAP28-204ENST00000419673 SCRIBQ14160 1630 aa5.48□□□□□ -1.53
ARHGAP28-204ENST00000419673 SMARCA2P51531 1590 aa5.46□□□□□ -1.54
ARHGAP28-204ENST00000419673 ZCCHC6Q5VYS8 1495 aaKnown RBP5.45□□□□□ -1.54
ARHGAP28-204ENST00000419673 AEBP2Q6ZN18 517 aaPredicted RBP5.44□□□□□ -1.54
ARHGAP28-204ENST00000419673 PDS5BQ9NTI5 1447 aa5.43□□□□□ -1.54
ARHGAP28-204ENST00000419673 HMGXB3Q12766 1538 aa5.42□□□□□ -1.54
ARHGAP28-204ENST00000419673 LAMC3Q9Y6N6 1575 aa5.42□□□□□ -1.54
ARHGAP28-204ENST00000419673 TRIM41Q8WV44 630 aa5.41□□□□□ -1.54
ARHGAP28-204ENST00000419673 NCAPD3P42695 1498 aa5.41□□□□□ -1.54
ARHGAP28-204ENST00000419673 OSCARQ8IYS5 282 aa5.34□□□□□ -1.55
ARHGAP28-204ENST00000419673 MRC2Q9UBG0 1479 aa5.34□□□□□ -1.55
ARHGAP28-204ENST00000419673 THOC2Q8NI27 1593 aaKnown RBP5.32□□□□□ -1.56
ARHGAP28-204ENST00000419673 BAZ1BQ9UIG0 1483 aaKnown RBP5.32□□□□□ -1.56
ARHGAP28-204ENST00000419673 BAZ1AQ9NRL2 1556 aaPredicted RBP5.32□□□□□ -1.56
ARHGAP28-204ENST00000419673 WDR62O43379 1518 aa5.28□□□□□ -1.56
ARHGAP28-204ENST00000419673 ATAD2BQ9ULI0 1458 aa5.28□□□□□ -1.56
ARHGAP28-204ENST00000419673 CEP164Q9UPV0 1460 aa5.26□□□□□ -1.57
ARHGAP28-204ENST00000419673 ABCC8Q09428 1581 aa5.26□□□□□ -1.57
ARHGAP28-204ENST00000419673 SMARCA4P51532 1647 aa5.25□□□□□ -1.57
ARHGAP28-204ENST00000419673 PEG3Q9GZU2 1588 aa5.24□□□□□ -1.57
ARHGAP28-204ENST00000419673 WDR97A6NE52 1622 aa5.23□□□□□ -1.57
ARHGAP28-204ENST00000419673 RSF1Q96T23 1441 aaPredicted RBP5.22□□□□□ -1.57
ARHGAP28-204ENST00000419673 TRHP20396 242 aaPredicted RBP5.22□□□□□ -1.57
ARHGAP28-204ENST00000419673 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
ARHGAP28-204ENST00000419673 IFT140Q96RY7 1462 aa5.21□□□□□ -1.57
ARHGAP28-204ENST00000419673 KIF21AQ7Z4S6 1674 aa5.2□□□□□ -1.58
ARHGAP28-204ENST00000419673 RIMBP3CA6NJZ7 1639 aa5.19□□□□□ -1.58
ARHGAP28-204ENST00000419673 RIMBP3BA6NNM3 1639 aa5.19□□□□□ -1.58
ARHGAP28-204ENST00000419673 RIMBP3Q9UFD9 1639 aa5.19□□□□□ -1.58
ARHGAP28-204ENST00000419673 PRDM2Q13029 1718 aa5.15□□□□□ -1.59
ARHGAP28-204ENST00000419673 FANCD2Q9BXW9 1451 aa5.15□□□□□ -1.59
ARHGAP28-204ENST00000419673 SYNJ1O43426 1573 aa5.14□□□□□ -1.59
ARHGAP28-204ENST00000419673 ARHGEF11O15085 1522 aa5.13□□□□□ -1.59
ARHGAP28-204ENST00000419673 NESP48681 1621 aa5.13□□□□□ -1.59
ARHGAP28-204ENST00000419673 NPM1P06748 294 aaKnown RBP eCLIP5.08□□□□□ -1.6
ARHGAP28-204ENST00000419673 ERCC6L2Q5T890 1561 aa5.08□□□□□ -1.6
ARHGAP28-204ENST00000419673 CFTRP13569 1480 aa5.08□□□□□ -1.6
ARHGAP28-204ENST00000419673 FAM9AQ8IZU1 332 aaPredicted RBP5.08□□□□□ -1.6
ARHGAP28-204ENST00000419673 MAGI1Q96QZ7 1491 aaPredicted RBP5.06□□□□□ -1.6
ARHGAP28-204ENST00000419673 CYB5RLQ6IPT4 315 aa5.06□□□□□ -1.6
ARHGAP28-204ENST00000419673 DNMBPQ6XZF7 1577 aa5.05□□□□□ -1.6
ARHGAP28-204ENST00000419673 TOP2AP11388 1531 aaKnown RBP5.04□□□□□ -1.6
ARHGAP28-204ENST00000419673 CHMP7Q8WUX9 453 aaPredicted RBP5.03□□□□□ -1.6
ARHGAP28-204ENST00000419673 MROH2BQ7Z745 1585 aa5.02□□□□□ -1.61
ARHGAP28-204ENST00000419673 EIF4G3O43432 1585 aaKnown RBP5.02□□□□□ -1.61
ARHGAP28-204ENST00000419673 ARAP1Q96P48 1450 aa5.02□□□□□ -1.61
ARHGAP28-204ENST00000419673 CHD1O14646 1710 aa5.01□□□□□ -1.61
ARHGAP28-204ENST00000419673 URB2Q14146 1524 aaKnown RBP5□□□□□ -1.61
ARHGAP28-204ENST00000419673 TOP2BQ02880 1626 aa5□□□□□ -1.61
ARHGAP28-204ENST00000419673 GRIN2BQ13224 1484 aa5□□□□□ -1.61
ARHGAP28-204ENST00000419673 FBLN2P98095 1184 aa5□□□□□ -1.61
ARHGAP28-204ENST00000419673 SYNJ2O15056 1496 aa5□□□□□ -1.61
ARHGAP28-204ENST00000419673 CLASP1Q7Z460 1538 aa4.99□□□□□ -1.61
ARHGAP28-204ENST00000419673 TOPBP1Q92547 1522 aa4.99□□□□□ -1.61
ARHGAP28-204ENST00000419673 GAPVD1Q14C86 1478 aa4.97□□□□□ -1.61
ARHGAP28-204ENST00000419673 FBXO41Q8TF61 875 aa4.96□□□□□ -1.62
ARHGAP28-204ENST00000419673 TEX14Q8IWB6 1497 aa4.96□□□□□ -1.62
ARHGAP28-204ENST00000419673 SOGA1O94964 1423 aa4.94□□□□□ -1.62
ARHGAP28-204ENST00000419673 KDM6BO15054 1643 aa4.94□□□□□ -1.62
ARHGAP28-204ENST00000419673 SNAPC4Q5SXM2 1469 aa4.94□□□□□ -1.62
ARHGAP28-204ENST00000419673 ILDR1Q86SU0 546 aaPredicted RBP4.93□□□□□ -1.62
ARHGAP28-204ENST00000419673 TARBP1Q13395 1621 aaKnown RBP4.92□□□□□ -1.62
ARHGAP28-204ENST00000419673 MAPKBP1O60336 1514 aa4.92□□□□□ -1.62
ARHGAP28-204ENST00000419673 ZNF608Q9ULD9 1512 aaPredicted RBP4.91□□□□□ -1.62
ARHGAP28-204ENST00000419673 PBRM1Q86U86 1689 aa4.9□□□□□ -1.62
ARHGAP28-204ENST00000419673 KIAA0586Q9BVV6 1533 aa4.9□□□□□ -1.62
ARHGAP28-204ENST00000419673 ABCC10Q5T3U5 1492 aa4.9□□□□□ -1.63
ARHGAP28-204ENST00000419673 WIZO95785 1651 aa4.9□□□□□ -1.63
ARHGAP28-204ENST00000419673 PLB1Q6P1J6 1458 aa4.9□□□□□ -1.63
ARHGAP28-204ENST00000419673 PHLDB1Q86UU1 1377 aa4.89□□□□□ -1.63
ARHGAP28-204ENST00000419673 FHAD1B1AJZ9 1412 aa4.88□□□□□ -1.63
ARHGAP28-204ENST00000419673 AQRO60306 1485 aaKnown RBP eCLIP4.88□□□□□ -1.63
ARHGAP28-204ENST00000419673 POLA1P09884 1462 aaPredicted RBP4.88□□□□□ -1.63
ARHGAP28-204ENST00000419673 CARMIL2Q6F5E8 1435 aa4.87□□□□□ -1.63
ARHGAP28-204ENST00000419673 GLI2P10070 1586 aa4.87□□□□□ -1.63
ARHGAP28-204ENST00000419673 FAM69CQ0P6D2 419 aa4.87□□□□□ -1.63
ARHGAP28-204ENST00000419673 DMRT2Q9Y5R5 561 aa4.87□□□□□ -1.63
ARHGAP28-204ENST00000419673 SHROOM2Q13796 1616 aa4.86□□□□□ -1.63
ARHGAP28-204ENST00000419673 GRIN2AQ12879 1464 aa4.86□□□□□ -1.63
ARHGAP28-204ENST00000419673 ERICH3Q5RHP9 1530 aa4.86□□□□□ -1.63
ARHGAP28-204ENST00000419673 FOXD1Q16676 465 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms