RNA–Protein interactions for RNA: ENST00000416843.1

AC006987.3-201, humanhuman

BASIC

Gene AC006987.3, Length 406 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006987.3-201ENST00000416843 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
AC006987.3-201ENST00000416843 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
AC006987.3-201ENST00000416843 ABCC9O60706 1549 aa22.62■■□□□ 1.21
AC006987.3-201ENST00000416843 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
AC006987.3-201ENST00000416843 NACADO15069 1562 aa21.44■■□□□ 1.02
AC006987.3-201ENST00000416843 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
AC006987.3-201ENST00000416843 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
AC006987.3-201ENST00000416843 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
AC006987.3-201ENST00000416843 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
AC006987.3-201ENST00000416843 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
AC006987.3-201ENST00000416843 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
AC006987.3-201ENST00000416843 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
AC006987.3-201ENST00000416843 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
AC006987.3-201ENST00000416843 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
AC006987.3-201ENST00000416843 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
AC006987.3-201ENST00000416843 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
AC006987.3-201ENST00000416843 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
AC006987.3-201ENST00000416843 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
AC006987.3-201ENST00000416843 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
AC006987.3-201ENST00000416843 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
AC006987.3-201ENST00000416843 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
AC006987.3-201ENST00000416843 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
AC006987.3-201ENST00000416843 SMARCA2P51531 1590 aa19.73■□□□□ 0.75
AC006987.3-201ENST00000416843 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
AC006987.3-201ENST00000416843 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
AC006987.3-201ENST00000416843 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
AC006987.3-201ENST00000416843 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
AC006987.3-201ENST00000416843 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
AC006987.3-201ENST00000416843 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
AC006987.3-201ENST00000416843 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
AC006987.3-201ENST00000416843 NESP48681 1621 aa19.49■□□□□ 0.71
AC006987.3-201ENST00000416843 WIZO95785 1651 aa19.42■□□□□ 0.7
AC006987.3-201ENST00000416843 CUX2O14529 1486 aa19.36■□□□□ 0.69
AC006987.3-201ENST00000416843 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.69
AC006987.3-201ENST00000416843 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
AC006987.3-201ENST00000416843 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
AC006987.3-201ENST00000416843 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
AC006987.3-201ENST00000416843 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
AC006987.3-201ENST00000416843 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
AC006987.3-201ENST00000416843 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
AC006987.3-201ENST00000416843 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
AC006987.3-201ENST00000416843 CFTRP13569 1480 aa19.03■□□□□ 0.64
AC006987.3-201ENST00000416843 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
AC006987.3-201ENST00000416843 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
AC006987.3-201ENST00000416843 WDR62O43379 1518 aa19.01■□□□□ 0.63
AC006987.3-201ENST00000416843 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
AC006987.3-201ENST00000416843 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
AC006987.3-201ENST00000416843 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
AC006987.3-201ENST00000416843 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
AC006987.3-201ENST00000416843 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
AC006987.3-201ENST00000416843 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.57
AC006987.3-201ENST00000416843 ZNF608Q9ULD9 1512 aaPredicted RBP18.61■□□□□ 0.57
AC006987.3-201ENST00000416843 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
AC006987.3-201ENST00000416843 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
AC006987.3-201ENST00000416843 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
AC006987.3-201ENST00000416843 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
AC006987.3-201ENST00000416843 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
AC006987.3-201ENST00000416843 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
AC006987.3-201ENST00000416843 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
AC006987.3-201ENST00000416843 CUX1P39880 1505 aa18.44■□□□□ 0.54
AC006987.3-201ENST00000416843 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.54
AC006987.3-201ENST00000416843 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
AC006987.3-201ENST00000416843 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
AC006987.3-201ENST00000416843 WRNQ14191 1432 aaPredicted RBP eCLIP18.42■□□□□ 0.54
AC006987.3-201ENST00000416843 SOGA1O94964 1423 aa18.39■□□□□ 0.53
AC006987.3-201ENST00000416843 CHD1O14646 1710 aa18.36■□□□□ 0.53
AC006987.3-201ENST00000416843 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
AC006987.3-201ENST00000416843 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
AC006987.3-201ENST00000416843 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
AC006987.3-201ENST00000416843 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
AC006987.3-201ENST00000416843 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
AC006987.3-201ENST00000416843 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
AC006987.3-201ENST00000416843 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
AC006987.3-201ENST00000416843 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
AC006987.3-201ENST00000416843 FBLN2P98095 1184 aa18.26■□□□□ 0.51
AC006987.3-201ENST00000416843 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
AC006987.3-201ENST00000416843 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
AC006987.3-201ENST00000416843 EEA1Q15075 1411 aa18.23■□□□□ 0.51
AC006987.3-201ENST00000416843 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
AC006987.3-201ENST00000416843 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
AC006987.3-201ENST00000416843 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
AC006987.3-201ENST00000416843 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
AC006987.3-201ENST00000416843 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
AC006987.3-201ENST00000416843 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
AC006987.3-201ENST00000416843 SYNJ2O15056 1496 aa18.14■□□□□ 0.5
AC006987.3-201ENST00000416843 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
AC006987.3-201ENST00000416843 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
AC006987.3-201ENST00000416843 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
AC006987.3-201ENST00000416843 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
AC006987.3-201ENST00000416843 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
AC006987.3-201ENST00000416843 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
AC006987.3-201ENST00000416843 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
AC006987.3-201ENST00000416843 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
AC006987.3-201ENST00000416843 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
AC006987.3-201ENST00000416843 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
AC006987.3-201ENST00000416843 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
AC006987.3-201ENST00000416843 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
AC006987.3-201ENST00000416843 CEP170Q5SW79 1584 aa17.96■□□□□ 0.47
AC006987.3-201ENST00000416843 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
AC006987.3-201ENST00000416843 NUP160Q12769 1436 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms