RNA–Protein interactions for RNA: ENST00000416587.5

RNF144A-202, Transcript of ring finger protein 144A, humanhuman

TSL 5

Gene RNF144A, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-202ENST00000416587 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
RNF144A-202ENST00000416587 ABCC9O60706 1549 aa17.39■□□□□ 0.37
RNF144A-202ENST00000416587 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
RNF144A-202ENST00000416587 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
RNF144A-202ENST00000416587 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
RNF144A-202ENST00000416587 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
RNF144A-202ENST00000416587 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
RNF144A-202ENST00000416587 NACADO15069 1562 aa16.13■□□□□ 0.17
RNF144A-202ENST00000416587 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
RNF144A-202ENST00000416587 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
RNF144A-202ENST00000416587 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
RNF144A-202ENST00000416587 MYO15BQ96JP2 1530 aa15.8■□□□□ 0.12
RNF144A-202ENST00000416587 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
RNF144A-202ENST00000416587 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
RNF144A-202ENST00000416587 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
RNF144A-202ENST00000416587 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
RNF144A-202ENST00000416587 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
RNF144A-202ENST00000416587 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
RNF144A-202ENST00000416587 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
RNF144A-202ENST00000416587 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
RNF144A-202ENST00000416587 CUX2O14529 1486 aa15.15■□□□□ 0.02
RNF144A-202ENST00000416587 ERCC6Q03468 1493 aa15.02■□□□□ -0
RNF144A-202ENST00000416587 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
RNF144A-202ENST00000416587 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
RNF144A-202ENST00000416587 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.03
RNF144A-202ENST00000416587 NESP48681 1621 aa14.83□□□□□ -0.04
RNF144A-202ENST00000416587 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
RNF144A-202ENST00000416587 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
RNF144A-202ENST00000416587 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
RNF144A-202ENST00000416587 THOC2Q8NI27 1593 aaKnown RBP14.71□□□□□ -0.05
RNF144A-202ENST00000416587 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
RNF144A-202ENST00000416587 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
RNF144A-202ENST00000416587 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
RNF144A-202ENST00000416587 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
RNF144A-202ENST00000416587 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
RNF144A-202ENST00000416587 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
RNF144A-202ENST00000416587 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
RNF144A-202ENST00000416587 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
RNF144A-202ENST00000416587 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
RNF144A-202ENST00000416587 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
RNF144A-202ENST00000416587 WDR62O43379 1518 aa14.44□□□□□ -0.1
RNF144A-202ENST00000416587 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
RNF144A-202ENST00000416587 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
RNF144A-202ENST00000416587 FANCD2Q9BXW9 1451 aa14.29□□□□□ -0.12
RNF144A-202ENST00000416587 CFTRP13569 1480 aa14.22□□□□□ -0.13
RNF144A-202ENST00000416587 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
RNF144A-202ENST00000416587 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
RNF144A-202ENST00000416587 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
RNF144A-202ENST00000416587 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
RNF144A-202ENST00000416587 WIZO95785 1651 aa14.19□□□□□ -0.14
RNF144A-202ENST00000416587 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
RNF144A-202ENST00000416587 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
RNF144A-202ENST00000416587 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
RNF144A-202ENST00000416587 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
RNF144A-202ENST00000416587 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
RNF144A-202ENST00000416587 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
RNF144A-202ENST00000416587 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
RNF144A-202ENST00000416587 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
RNF144A-202ENST00000416587 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
RNF144A-202ENST00000416587 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
RNF144A-202ENST00000416587 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNF144A-202ENST00000416587 FBLN2P98095 1184 aa13.91□□□□□ -0.18
RNF144A-202ENST00000416587 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
RNF144A-202ENST00000416587 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
RNF144A-202ENST00000416587 CHD1O14646 1710 aa13.89□□□□□ -0.19
RNF144A-202ENST00000416587 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
RNF144A-202ENST00000416587 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
RNF144A-202ENST00000416587 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
RNF144A-202ENST00000416587 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
RNF144A-202ENST00000416587 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
RNF144A-202ENST00000416587 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
RNF144A-202ENST00000416587 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
RNF144A-202ENST00000416587 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
RNF144A-202ENST00000416587 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
RNF144A-202ENST00000416587 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
RNF144A-202ENST00000416587 SOGA1O94964 1423 aa13.74□□□□□ -0.21
RNF144A-202ENST00000416587 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
RNF144A-202ENST00000416587 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
RNF144A-202ENST00000416587 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
RNF144A-202ENST00000416587 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
RNF144A-202ENST00000416587 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
RNF144A-202ENST00000416587 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
RNF144A-202ENST00000416587 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
RNF144A-202ENST00000416587 CUX1P39880 1505 aa13.58□□□□□ -0.24
RNF144A-202ENST00000416587 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
RNF144A-202ENST00000416587 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
RNF144A-202ENST00000416587 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
RNF144A-202ENST00000416587 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
RNF144A-202ENST00000416587 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
RNF144A-202ENST00000416587 NUP160Q12769 1436 aa13.47□□□□□ -0.25
RNF144A-202ENST00000416587 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
RNF144A-202ENST00000416587 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
RNF144A-202ENST00000416587 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
RNF144A-202ENST00000416587 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
RNF144A-202ENST00000416587 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
RNF144A-202ENST00000416587 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
RNF144A-202ENST00000416587 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
RNF144A-202ENST00000416587 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
RNF144A-202ENST00000416587 ABCC10Q5T3U5 1492 aa13.38□□□□□ -0.27
RNF144A-202ENST00000416587 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms