RNA–Protein interactions for RNA: ENST00000416373.6

RAD23B-202, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 1 (best) BASIC

Gene RAD23B, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-202ENST00000416373 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
RAD23B-202ENST00000416373 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
RAD23B-202ENST00000416373 AEBP2Q6ZN18 517 aaPredicted RBP11.89□□□□□ -0.51
RAD23B-202ENST00000416373 ABCC9O60706 1549 aa11.73□□□□□ -0.53
RAD23B-202ENST00000416373 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
RAD23B-202ENST00000416373 CCDC180Q9P1Z9 1646 aa11.43□□□□□ -0.58
RAD23B-202ENST00000416373 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
RAD23B-202ENST00000416373 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAD23B-202ENST00000416373 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
RAD23B-202ENST00000416373 NACADO15069 1562 aa10.93□□□□□ -0.66
RAD23B-202ENST00000416373 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
RAD23B-202ENST00000416373 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
RAD23B-202ENST00000416373 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
RAD23B-202ENST00000416373 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
RAD23B-202ENST00000416373 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
RAD23B-202ENST00000416373 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
RAD23B-202ENST00000416373 DNAJC5Q9H3Z4 198 aa10.69□□□□□ -0.7
RAD23B-202ENST00000416373 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
RAD23B-202ENST00000416373 MYT1Q01538 1121 aa10.59□□□□□ -0.71
RAD23B-202ENST00000416373 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
RAD23B-202ENST00000416373 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
RAD23B-202ENST00000416373 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
RAD23B-202ENST00000416373 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
RAD23B-202ENST00000416373 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
RAD23B-202ENST00000416373 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
RAD23B-202ENST00000416373 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
RAD23B-202ENST00000416373 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
RAD23B-202ENST00000416373 FBLN2P98095 1184 aa10.28□□□□□ -0.76
RAD23B-202ENST00000416373 HRCP23327 699 aa10.28□□□□□ -0.76
RAD23B-202ENST00000416373 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
RAD23B-202ENST00000416373 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.77
RAD23B-202ENST00000416373 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
RAD23B-202ENST00000416373 APLP2Q06481 763 aa10.25□□□□□ -0.77
RAD23B-202ENST00000416373 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
RAD23B-202ENST00000416373 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
RAD23B-202ENST00000416373 SMARCA2P51531 1590 aa10.21□□□□□ -0.78
RAD23B-202ENST00000416373 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.78
RAD23B-202ENST00000416373 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
RAD23B-202ENST00000416373 SCAF1Q9H7N4 1312 aaKnown RBP10.16□□□□□ -0.78
RAD23B-202ENST00000416373 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
RAD23B-202ENST00000416373 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
RAD23B-202ENST00000416373 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
RAD23B-202ENST00000416373 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
RAD23B-202ENST00000416373 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
RAD23B-202ENST00000416373 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
RAD23B-202ENST00000416373 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
RAD23B-202ENST00000416373 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
RAD23B-202ENST00000416373 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
RAD23B-202ENST00000416373 NCBP3Q53F19 620 aaKnown RBP10.01□□□□□ -0.81
RAD23B-202ENST00000416373 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
RAD23B-202ENST00000416373 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
RAD23B-202ENST00000416373 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.81
RAD23B-202ENST00000416373 CUX2O14529 1486 aa9.94□□□□□ -0.82
RAD23B-202ENST00000416373 SMARCA4P51532 1647 aa9.91□□□□□ -0.82
RAD23B-202ENST00000416373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.91□□□□□ -0.82
RAD23B-202ENST00000416373 HNRNPUL2Q1KMD3 747 aaKnown RBP9.91□□□□□ -0.82
RAD23B-202ENST00000416373 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
RAD23B-202ENST00000416373 HMGXB3Q12766 1538 aa9.89□□□□□ -0.83
RAD23B-202ENST00000416373 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
RAD23B-202ENST00000416373 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
RAD23B-202ENST00000416373 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
RAD23B-202ENST00000416373 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
RAD23B-202ENST00000416373 ABCC8Q09428 1581 aa9.85□□□□□ -0.83
RAD23B-202ENST00000416373 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
RAD23B-202ENST00000416373 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
RAD23B-202ENST00000416373 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
RAD23B-202ENST00000416373 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
RAD23B-202ENST00000416373 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
RAD23B-202ENST00000416373 NESP48681 1621 aa9.81□□□□□ -0.84
RAD23B-202ENST00000416373 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
RAD23B-202ENST00000416373 RANGAP1P46060 587 aaPredicted RBP9.8□□□□□ -0.84
RAD23B-202ENST00000416373 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
RAD23B-202ENST00000416373 SOGA1O94964 1423 aa9.75□□□□□ -0.85
RAD23B-202ENST00000416373 WIZO95785 1651 aa9.73□□□□□ -0.85
RAD23B-202ENST00000416373 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
RAD23B-202ENST00000416373 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.85
RAD23B-202ENST00000416373 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.85
RAD23B-202ENST00000416373 PRDM2Q13029 1718 aa9.71□□□□□ -0.86
RAD23B-202ENST00000416373 WRNQ14191 1432 aaPredicted RBP eCLIP9.7□□□□□ -0.86
RAD23B-202ENST00000416373 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
RAD23B-202ENST00000416373 CCDC88BA6NC98 1476 aa9.67□□□□□ -0.86
RAD23B-202ENST00000416373 CFTRP13569 1480 aa9.67□□□□□ -0.86
RAD23B-202ENST00000416373 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
RAD23B-202ENST00000416373 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
RAD23B-202ENST00000416373 ADRA2BP18089 450 aa9.64□□□□□ -0.87
RAD23B-202ENST00000416373 CDK11AQ9UQ88 783 aaPredicted RBP9.63□□□□□ -0.87
RAD23B-202ENST00000416373 KCNA4P22459 653 aa9.62□□□□□ -0.87
RAD23B-202ENST00000416373 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
RAD23B-202ENST00000416373 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
RAD23B-202ENST00000416373 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
RAD23B-202ENST00000416373 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
RAD23B-202ENST00000416373 AQRO60306 1485 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■■■□ 21.5
RAD23B-202ENST00000416373 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
RAD23B-202ENST00000416373 ARXQ96QS3 562 aa9.56□□□□□ -0.88
RAD23B-202ENST00000416373 ARID4BQ4LE39 1312 aaPredicted RBP9.55□□□□□ -0.88
RAD23B-202ENST00000416373 KCNH8Q96L42 1107 aa9.54□□□□□ -0.88
RAD23B-202ENST00000416373 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
RAD23B-202ENST00000416373 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
RAD23B-202ENST00000416373 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
RAD23B-202ENST00000416373 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms