RNA–Protein interactions for RNA: ENST00000416162.6

MEST-206, mesoderm specific transcript, humanhuman

TSL 1 (best) BASIC

Gene MEST, Length 2,158 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-206ENST00000416162 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
MEST-206ENST00000416162 ABCC9O60706 1549 aa25.81■■□□□ 1.72
MEST-206ENST00000416162 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
MEST-206ENST00000416162 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
MEST-206ENST00000416162 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
MEST-206ENST00000416162 NACADO15069 1562 aa24.32■■□□□ 1.48
MEST-206ENST00000416162 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
MEST-206ENST00000416162 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
MEST-206ENST00000416162 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.42
MEST-206ENST00000416162 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
MEST-206ENST00000416162 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
MEST-206ENST00000416162 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
MEST-206ENST00000416162 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
MEST-206ENST00000416162 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
MEST-206ENST00000416162 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
MEST-206ENST00000416162 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
MEST-206ENST00000416162 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
MEST-206ENST00000416162 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
MEST-206ENST00000416162 HRCP23327 699 aa22.99■■□□□ 1.27
MEST-206ENST00000416162 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
MEST-206ENST00000416162 CUX2O14529 1486 aa22.52■■□□□ 1.2
MEST-206ENST00000416162 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
MEST-206ENST00000416162 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
MEST-206ENST00000416162 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
MEST-206ENST00000416162 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
MEST-206ENST00000416162 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
MEST-206ENST00000416162 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
MEST-206ENST00000416162 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
MEST-206ENST00000416162 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
MEST-206ENST00000416162 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
MEST-206ENST00000416162 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
MEST-206ENST00000416162 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
MEST-206ENST00000416162 NESP48681 1621 aa22.06■■□□□ 1.12
MEST-206ENST00000416162 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
MEST-206ENST00000416162 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
MEST-206ENST00000416162 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
MEST-206ENST00000416162 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
MEST-206ENST00000416162 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
MEST-206ENST00000416162 MYT1Q01538 1121 aa21.88■■□□□ 1.09
MEST-206ENST00000416162 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
MEST-206ENST00000416162 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
MEST-206ENST00000416162 ZEB1P37275 1124 aaPredicted RBP21.78■■□□□ 1.08
MEST-206ENST00000416162 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
MEST-206ENST00000416162 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
MEST-206ENST00000416162 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
MEST-206ENST00000416162 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
MEST-206ENST00000416162 WDR62O43379 1518 aa21.65■■□□□ 1.06
MEST-206ENST00000416162 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
MEST-206ENST00000416162 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
MEST-206ENST00000416162 WIZO95785 1651 aa21.5■■□□□ 1.03
MEST-206ENST00000416162 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
MEST-206ENST00000416162 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
MEST-206ENST00000416162 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
MEST-206ENST00000416162 CFTRP13569 1480 aa21.36■■□□□ 1.01
MEST-206ENST00000416162 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
MEST-206ENST00000416162 PRDM2Q13029 1718 aa21.29■■□□□ 1
MEST-206ENST00000416162 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
MEST-206ENST00000416162 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
MEST-206ENST00000416162 ACIN1Q9UKV3 1341 aaKnown RBP21.2■□□□□ 0.98
MEST-206ENST00000416162 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
MEST-206ENST00000416162 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
MEST-206ENST00000416162 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
MEST-206ENST00000416162 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
MEST-206ENST00000416162 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
MEST-206ENST00000416162 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
MEST-206ENST00000416162 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
MEST-206ENST00000416162 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
MEST-206ENST00000416162 ABCC8Q09428 1581 aa21■□□□□ 0.95
MEST-206ENST00000416162 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
MEST-206ENST00000416162 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
MEST-206ENST00000416162 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
MEST-206ENST00000416162 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
MEST-206ENST00000416162 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
MEST-206ENST00000416162 TTBK1Q5TCY1 1321 aaPredicted RBP20.91■□□□□ 0.94
MEST-206ENST00000416162 CHD1O14646 1710 aa20.91■□□□□ 0.94
MEST-206ENST00000416162 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
MEST-206ENST00000416162 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
MEST-206ENST00000416162 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
MEST-206ENST00000416162 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
MEST-206ENST00000416162 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.91
MEST-206ENST00000416162 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
MEST-206ENST00000416162 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
MEST-206ENST00000416162 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
MEST-206ENST00000416162 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
MEST-206ENST00000416162 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
MEST-206ENST00000416162 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
MEST-206ENST00000416162 FBLN2P98095 1184 aa20.64■□□□□ 0.89
MEST-206ENST00000416162 SOGA1O94964 1423 aa20.62■□□□□ 0.89
MEST-206ENST00000416162 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
MEST-206ENST00000416162 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
MEST-206ENST00000416162 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
MEST-206ENST00000416162 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
MEST-206ENST00000416162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
MEST-206ENST00000416162 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
MEST-206ENST00000416162 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
MEST-206ENST00000416162 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
MEST-206ENST00000416162 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
MEST-206ENST00000416162 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
MEST-206ENST00000416162 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
MEST-206ENST00000416162 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms