RNA–Protein interactions for RNA: ENST00000415314.6

GPATCH4-202, Transcript of G-patch domain containing 4, humanhuman

APPRIS ALT2 TSL 3

Gene GPATCH4, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-202ENST00000415314 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
GPATCH4-202ENST00000415314 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
GPATCH4-202ENST00000415314 ABCC9O60706 1549 aa28.28■■■□□ 2.12
GPATCH4-202ENST00000415314 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
GPATCH4-202ENST00000415314 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
GPATCH4-202ENST00000415314 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
GPATCH4-202ENST00000415314 NACADO15069 1562 aa27.02■■□□□ 1.92
GPATCH4-202ENST00000415314 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
GPATCH4-202ENST00000415314 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
GPATCH4-202ENST00000415314 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
GPATCH4-202ENST00000415314 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
GPATCH4-202ENST00000415314 UNC13AQ9UPW8 1703 aa26.5■■□□□ 1.83
GPATCH4-202ENST00000415314 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
GPATCH4-202ENST00000415314 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
GPATCH4-202ENST00000415314 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
GPATCH4-202ENST00000415314 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
GPATCH4-202ENST00000415314 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
GPATCH4-202ENST00000415314 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
GPATCH4-202ENST00000415314 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
GPATCH4-202ENST00000415314 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
GPATCH4-202ENST00000415314 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
GPATCH4-202ENST00000415314 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
GPATCH4-202ENST00000415314 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
GPATCH4-202ENST00000415314 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
GPATCH4-202ENST00000415314 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
GPATCH4-202ENST00000415314 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
GPATCH4-202ENST00000415314 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
GPATCH4-202ENST00000415314 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
GPATCH4-202ENST00000415314 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
GPATCH4-202ENST00000415314 WIZO95785 1651 aa24.5■■□□□ 1.51
GPATCH4-202ENST00000415314 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
GPATCH4-202ENST00000415314 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
GPATCH4-202ENST00000415314 NESP48681 1621 aa24.39■■□□□ 1.49
GPATCH4-202ENST00000415314 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
GPATCH4-202ENST00000415314 CUX2O14529 1486 aa24.21■■□□□ 1.47
GPATCH4-202ENST00000415314 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
GPATCH4-202ENST00000415314 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
GPATCH4-202ENST00000415314 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
GPATCH4-202ENST00000415314 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
GPATCH4-202ENST00000415314 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
GPATCH4-202ENST00000415314 CFTRP13569 1480 aa23.99■■□□□ 1.43
GPATCH4-202ENST00000415314 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
GPATCH4-202ENST00000415314 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
GPATCH4-202ENST00000415314 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
GPATCH4-202ENST00000415314 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
GPATCH4-202ENST00000415314 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
GPATCH4-202ENST00000415314 WDR62O43379 1518 aa23.82■■□□□ 1.4
GPATCH4-202ENST00000415314 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
GPATCH4-202ENST00000415314 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
GPATCH4-202ENST00000415314 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
GPATCH4-202ENST00000415314 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
GPATCH4-202ENST00000415314 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
GPATCH4-202ENST00000415314 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
GPATCH4-202ENST00000415314 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
GPATCH4-202ENST00000415314 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
GPATCH4-202ENST00000415314 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
GPATCH4-202ENST00000415314 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
GPATCH4-202ENST00000415314 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
GPATCH4-202ENST00000415314 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
GPATCH4-202ENST00000415314 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
GPATCH4-202ENST00000415314 SOGA1O94964 1423 aa23.24■■□□□ 1.31
GPATCH4-202ENST00000415314 CUX1P39880 1505 aa23.23■■□□□ 1.31
GPATCH4-202ENST00000415314 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
GPATCH4-202ENST00000415314 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
GPATCH4-202ENST00000415314 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.3
GPATCH4-202ENST00000415314 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.32e-7■■■■□ 24.2
GPATCH4-202ENST00000415314 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
GPATCH4-202ENST00000415314 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
GPATCH4-202ENST00000415314 FBLN2P98095 1184 aa23.05■■□□□ 1.28
GPATCH4-202ENST00000415314 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
GPATCH4-202ENST00000415314 CHD1O14646 1710 aa23■■□□□ 1.27
GPATCH4-202ENST00000415314 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
GPATCH4-202ENST00000415314 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
GPATCH4-202ENST00000415314 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
GPATCH4-202ENST00000415314 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
GPATCH4-202ENST00000415314 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
GPATCH4-202ENST00000415314 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
GPATCH4-202ENST00000415314 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
GPATCH4-202ENST00000415314 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
GPATCH4-202ENST00000415314 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
GPATCH4-202ENST00000415314 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
GPATCH4-202ENST00000415314 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
GPATCH4-202ENST00000415314 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
GPATCH4-202ENST00000415314 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
GPATCH4-202ENST00000415314 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
GPATCH4-202ENST00000415314 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
GPATCH4-202ENST00000415314 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
GPATCH4-202ENST00000415314 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
GPATCH4-202ENST00000415314 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
GPATCH4-202ENST00000415314 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
GPATCH4-202ENST00000415314 CLASP1Q7Z460 1538 aa22.68■■□□□ 1.22
GPATCH4-202ENST00000415314 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
GPATCH4-202ENST00000415314 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
GPATCH4-202ENST00000415314 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
GPATCH4-202ENST00000415314 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
GPATCH4-202ENST00000415314 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
GPATCH4-202ENST00000415314 NUP160Q12769 1436 aa22.54■■□□□ 1.2
GPATCH4-202ENST00000415314 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
GPATCH4-202ENST00000415314 IGF1RP08069 1367 aa22.5■■□□□ 1.19
GPATCH4-202ENST00000415314 CUL7Q14999 1698 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms