RNA–Protein interactions for RNA: ENST00000411050.1

RN7SKP216-201, Transcript of RNA, 7SK small nuclear pseudogene 216, humanhuman

BASIC

Gene RN7SKP216, Length 312 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP216-201ENST00000411050 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
RN7SKP216-201ENST00000411050 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
RN7SKP216-201ENST00000411050 ABCC9O60706 1549 aa13.8□□□□□ -0.2
RN7SKP216-201ENST00000411050 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
RN7SKP216-201ENST00000411050 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
RN7SKP216-201ENST00000411050 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
RN7SKP216-201ENST00000411050 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
RN7SKP216-201ENST00000411050 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
RN7SKP216-201ENST00000411050 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
RN7SKP216-201ENST00000411050 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
RN7SKP216-201ENST00000411050 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
RN7SKP216-201ENST00000411050 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
RN7SKP216-201ENST00000411050 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
RN7SKP216-201ENST00000411050 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
RN7SKP216-201ENST00000411050 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
RN7SKP216-201ENST00000411050 BICRAQ9NZM4 1560 aa12.31□□□□□ -0.44
RN7SKP216-201ENST00000411050 CUX2O14529 1486 aa12.23□□□□□ -0.45
RN7SKP216-201ENST00000411050 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP216-201ENST00000411050 NACADO15069 1562 aa12.17□□□□□ -0.46
RN7SKP216-201ENST00000411050 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
RN7SKP216-201ENST00000411050 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
RN7SKP216-201ENST00000411050 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
RN7SKP216-201ENST00000411050 SHROOM4Q9ULL8 1493 aa11.85□□□□□ -0.51
RN7SKP216-201ENST00000411050 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP216-201ENST00000411050 FOXD1Q16676 465 aa11.76□□□□□ -0.53
RN7SKP216-201ENST00000411050 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
RN7SKP216-201ENST00000411050 TRHP20396 242 aaPredicted RBP11.6□□□□□ -0.55
RN7SKP216-201ENST00000411050 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
RN7SKP216-201ENST00000411050 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
RN7SKP216-201ENST00000411050 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
RN7SKP216-201ENST00000411050 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
RN7SKP216-201ENST00000411050 NESP48681 1621 aa11.57□□□□□ -0.56
RN7SKP216-201ENST00000411050 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
RN7SKP216-201ENST00000411050 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
RN7SKP216-201ENST00000411050 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
RN7SKP216-201ENST00000411050 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
RN7SKP216-201ENST00000411050 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
RN7SKP216-201ENST00000411050 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
RN7SKP216-201ENST00000411050 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
RN7SKP216-201ENST00000411050 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
RN7SKP216-201ENST00000411050 MSH5O43196 834 aa11.24□□□□□ -0.61
RN7SKP216-201ENST00000411050 ARAP1Q96P48 1450 aa11.22□□□□□ -0.61
RN7SKP216-201ENST00000411050 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
RN7SKP216-201ENST00000411050 WDR62O43379 1518 aa11.18□□□□□ -0.62
RN7SKP216-201ENST00000411050 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
RN7SKP216-201ENST00000411050 PDS5BQ9NTI5 1447 aa11.13□□□□□ -0.63
RN7SKP216-201ENST00000411050 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
RN7SKP216-201ENST00000411050 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
RN7SKP216-201ENST00000411050 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
RN7SKP216-201ENST00000411050 SOCS7O14512 581 aa11.06□□□□□ -0.64
RN7SKP216-201ENST00000411050 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
RN7SKP216-201ENST00000411050 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
RN7SKP216-201ENST00000411050 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
RN7SKP216-201ENST00000411050 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
RN7SKP216-201ENST00000411050 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
RN7SKP216-201ENST00000411050 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.65
RN7SKP216-201ENST00000411050 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
RN7SKP216-201ENST00000411050 HECW2Q9P2P5 1572 aa10.92□□□□□ -0.66
RN7SKP216-201ENST00000411050 CHD1O14646 1710 aa10.9□□□□□ -0.66
RN7SKP216-201ENST00000411050 SMARCA4P51532 1647 aa10.9□□□□□ -0.66
RN7SKP216-201ENST00000411050 RSF1Q96T23 1441 aaPredicted RBP10.9□□□□□ -0.66
RN7SKP216-201ENST00000411050 CEP164Q9UPV0 1460 aa10.89□□□□□ -0.67
RN7SKP216-201ENST00000411050 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP216-201ENST00000411050 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
RN7SKP216-201ENST00000411050 DISP3Q9P2K9 1392 aa10.83□□□□□ -0.68
RN7SKP216-201ENST00000411050 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
RN7SKP216-201ENST00000411050 FANCD2Q9BXW9 1451 aa10.79□□□□□ -0.68
RN7SKP216-201ENST00000411050 KIF13AQ9H1H9 1805 aa10.76□□□□□ -0.69
RN7SKP216-201ENST00000411050 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
RN7SKP216-201ENST00000411050 FBLN2P98095 1184 aa10.75□□□□□ -0.69
RN7SKP216-201ENST00000411050 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
RN7SKP216-201ENST00000411050 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
RN7SKP216-201ENST00000411050 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
RN7SKP216-201ENST00000411050 ADGRL1O94910 1474 aa10.69□□□□□ -0.7
RN7SKP216-201ENST00000411050 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
RN7SKP216-201ENST00000411050 PEG3Q9GZU2 1588 aa10.68□□□□□ -0.7
RN7SKP216-201ENST00000411050 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
RN7SKP216-201ENST00000411050 KDM6BO15054 1643 aa10.65□□□□□ -0.7
RN7SKP216-201ENST00000411050 SPATA31D1Q6ZQQ2 1576 aa10.63□□□□□ -0.71
RN7SKP216-201ENST00000411050 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.71
RN7SKP216-201ENST00000411050 SYNJ1O43426 1573 aa10.55□□□□□ -0.72
RN7SKP216-201ENST00000411050 FAM69CQ0P6D2 419 aa10.52□□□□□ -0.73
RN7SKP216-201ENST00000411050 CFTRP13569 1480 aa10.52□□□□□ -0.73
RN7SKP216-201ENST00000411050 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
RN7SKP216-201ENST00000411050 MROH2BQ7Z745 1585 aa10.49□□□□□ -0.73
RN7SKP216-201ENST00000411050 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
RN7SKP216-201ENST00000411050 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
RN7SKP216-201ENST00000411050 ABCC10Q5T3U5 1492 aa10.47□□□□□ -0.73
RN7SKP216-201ENST00000411050 TOPBP1Q92547 1522 aa10.47□□□□□ -0.73
RN7SKP216-201ENST00000411050 DIP2BQ9P265 1576 aa10.46□□□□□ -0.74
RN7SKP216-201ENST00000411050 CHMP7Q8WUX9 453 aaPredicted RBP10.44□□□□□ -0.74
RN7SKP216-201ENST00000411050 PPP6R1Q9UPN7 881 aa10.44□□□□□ -0.74
RN7SKP216-201ENST00000411050 CERKQ8TCT0 537 aa10.38□□□□□ -0.75
RN7SKP216-201ENST00000411050 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
RN7SKP216-201ENST00000411050 PRDM2Q13029 1718 aa10.35□□□□□ -0.75
RN7SKP216-201ENST00000411050 WIZO95785 1651 aa10.34□□□□□ -0.75
RN7SKP216-201ENST00000411050 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
RN7SKP216-201ENST00000411050 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
RN7SKP216-201ENST00000411050 RAD54L2Q9Y4B4 1467 aa10.32□□□□□ -0.76
RN7SKP216-201ENST00000411050 MAPKBP1O60336 1514 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms