RNA–Protein interactions for RNA: ENST00000410611.1

RN7SKP220-201, Transcript of RNA, 7SK small nuclear pseudogene 220, humanhuman

BASIC

Gene RN7SKP220, Length 288 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP220-201ENST00000410611 AEBP2Q6ZN18 517 aaPredicted RBP8.23□□□□□ -1.09
RN7SKP220-201ENST00000410611 CHIC1Q5VXU3 224 aa7.78□□□□□ -1.16
RN7SKP220-201ENST00000410611 NISCHQ9Y2I1 1504 aa7.43□□□□□ -1.22
RN7SKP220-201ENST00000410611 SENP3Q9H4L4 574 aaPredicted RBP7.18□□□□□ -1.26
RN7SKP220-201ENST00000410611 POTEDQ86YR6 584 aa7.15□□□□□ -1.26
RN7SKP220-201ENST00000410611 PHF23Q9BUL5 403 aaPredicted RBP6.99□□□□□ -1.29
RN7SKP220-201ENST00000410611 FOXD1Q16676 465 aa6.7□□□□□ -1.34
RN7SKP220-201ENST00000410611 CCDC180Q9P1Z9 1646 aa6.54□□□□□ -1.36
RN7SKP220-201ENST00000410611 MSH5O43196 834 aa6.52□□□□□ -1.37
RN7SKP220-201ENST00000410611 ABCC9O60706 1549 aa6.42□□□□□ -1.38
RN7SKP220-201ENST00000410611 MYO15BQ96JP2 1530 aa6.24□□□□□ -1.41
RN7SKP220-201ENST00000410611 NACADO15069 1562 aa6.22□□□□□ -1.41
RN7SKP220-201ENST00000410611 DCAF8L2P0C7V8 631 aa6.2□□□□□ -1.42
RN7SKP220-201ENST00000410611 PIAS4Q8N2W9 510 aaPredicted RBP6.19□□□□□ -1.42
RN7SKP220-201ENST00000410611 DCAF1Q9Y4B6 1507 aa6.19□□□□□ -1.42
RN7SKP220-201ENST00000410611 RB1CC1Q8TDY2 1594 aa6.18□□□□□ -1.42
RN7SKP220-201ENST00000410611 ZCCHC6Q5VYS8 1495 aaKnown RBP6.16□□□□□ -1.42
RN7SKP220-201ENST00000410611 SLC24A1O60721 1099 aa6.05□□□□□ -1.44
RN7SKP220-201ENST00000410611 PABPN1Q86U42 306 aaKnown RBP eCLIP6.05□□□□□ -1.44
RN7SKP220-201ENST00000410611 DNAJC5BQ9UF47 199 aa6.02□□□□□ -1.45
RN7SKP220-201ENST00000410611 BICRAQ9NZM4 1560 aa6.01□□□□□ -1.45
RN7SKP220-201ENST00000410611 SHROOM4Q9ULL8 1493 aa5.99□□□□□ -1.45
RN7SKP220-201ENST00000410611 UNC13AQ9UPW8 1703 aa5.95□□□□□ -1.46
RN7SKP220-201ENST00000410611 SCRIBQ14160 1630 aa5.92□□□□□ -1.46
RN7SKP220-201ENST00000410611 CACNB1Q02641 598 aaPredicted RBP5.91□□□□□ -1.46
RN7SKP220-201ENST00000410611 PPP6R1Q9UPN7 881 aa5.86□□□□□ -1.47
RN7SKP220-201ENST00000410611 ADRA2BP18089 450 aa5.85□□□□□ -1.47
RN7SKP220-201ENST00000410611 EIF4G1Q04637 1599 aaKnown RBP5.83□□□□□ -1.48
RN7SKP220-201ENST00000410611 CECR2Q9BXF3 1484 aa5.8□□□□□ -1.48
RN7SKP220-201ENST00000410611 CC2D2AQ9P2K1 1620 aa5.8□□□□□ -1.48
RN7SKP220-201ENST00000410611 NCAPD3P42695 1498 aa5.79□□□□□ -1.48
RN7SKP220-201ENST00000410611 ATAD2BQ9ULI0 1458 aa5.75□□□□□ -1.49
RN7SKP220-201ENST00000410611 BAZ1AQ9NRL2 1556 aaPredicted RBP5.73□□□□□ -1.49
RN7SKP220-201ENST00000410611 SMARCA2P51531 1590 aa5.72□□□□□ -1.49
RN7SKP220-201ENST00000410611 PEG3Q9GZU2 1588 aa5.72□□□□□ -1.49
RN7SKP220-201ENST00000410611 SMARCA4P51532 1647 aa5.71□□□□□ -1.5
RN7SKP220-201ENST00000410611 PLPPR3Q6T4P5 718 aa5.71□□□□□ -1.5
RN7SKP220-201ENST00000410611 MROH2BQ7Z745 1585 aa5.71□□□□□ -1.5
RN7SKP220-201ENST00000410611 RSF1Q96T23 1441 aaPredicted RBP5.68□□□□□ -1.5
RN7SKP220-201ENST00000410611 HMGXB3Q12766 1538 aa5.68□□□□□ -1.5
RN7SKP220-201ENST00000410611 BAZ1BQ9UIG0 1483 aaKnown RBP5.65□□□□□ -1.5
RN7SKP220-201ENST00000410611 CADPSQ9ULU8 1353 aa5.61□□□□□ -1.51
RN7SKP220-201ENST00000410611 WIZO95785 1651 aa5.59□□□□□ -1.52
RN7SKP220-201ENST00000410611 DMRT2Q9Y5R5 561 aa5.58□□□□□ -1.52
RN7SKP220-201ENST00000410611 EHMT2Q96KQ7 1210 aa5.57□□□□□ -1.52
RN7SKP220-201ENST00000410611 PDS5BQ9NTI5 1447 aa5.57□□□□□ -1.52
RN7SKP220-201ENST00000410611 NESP48681 1621 aa5.56□□□□□ -1.52
RN7SKP220-201ENST00000410611 TOP2AP11388 1531 aaKnown RBP5.56□□□□□ -1.52
RN7SKP220-201ENST00000410611 CFTRP13569 1480 aa5.56□□□□□ -1.52
RN7SKP220-201ENST00000410611 LAMC3Q9Y6N6 1575 aa5.55□□□□□ -1.52
RN7SKP220-201ENST00000410611 CCDC88BA6NC98 1476 aa5.55□□□□□ -1.52
RN7SKP220-201ENST00000410611 POTEHQ6S545 545 aa5.53□□□□□ -1.52
RN7SKP220-201ENST00000410611 CUX2O14529 1486 aa5.52□□□□□ -1.53
RN7SKP220-201ENST00000410611 ERCC6Q03468 1493 aa5.52□□□□□ -1.53
RN7SKP220-201ENST00000410611 SUPT5HO00267 1087 aaKnown RBP5.5□□□□□ -1.53
RN7SKP220-201ENST00000410611 MAPK8IP2Q13387 824 aaPredicted RBP5.5□□□□□ -1.53
RN7SKP220-201ENST00000410611 DAXXQ9UER7 740 aaPredicted RBP5.5□□□□□ -1.53
RN7SKP220-201ENST00000410611 FANCD2Q9BXW9 1451 aa5.48□□□□□ -1.53
RN7SKP220-201ENST00000410611 DCAF8L1A6NGE4 600 aa5.47□□□□□ -1.53
RN7SKP220-201ENST00000410611 RNF39Q9H2S5 420 aa5.47□□□□□ -1.53
RN7SKP220-201ENST00000410611 MRC2Q9UBG0 1479 aa5.46□□□□□ -1.53
RN7SKP220-201ENST00000410611 CEP164Q9UPV0 1460 aa5.45□□□□□ -1.54
RN7SKP220-201ENST00000410611 AMER1Q5JTC6 1135 aaPredicted RBP5.45□□□□□ -1.54
RN7SKP220-201ENST00000410611 DNAJC5Q9H3Z4 198 aa5.45□□□□□ -1.54
RN7SKP220-201ENST00000410611 WDR62O43379 1518 aa5.44□□□□□ -1.54
RN7SKP220-201ENST00000410611 ABCC8Q09428 1581 aa5.44□□□□□ -1.54
RN7SKP220-201ENST00000410611 THOC2Q8NI27 1593 aaKnown RBP5.44□□□□□ -1.54
RN7SKP220-201ENST00000410611 SCAF1Q9H7N4 1312 aaKnown RBP5.44□□□□□ -1.54
RN7SKP220-201ENST00000410611 NCBP3Q53F19 620 aaKnown RBP5.43□□□□□ -1.54
RN7SKP220-201ENST00000410611 URB2Q14146 1524 aaKnown RBP5.43□□□□□ -1.54
RN7SKP220-201ENST00000410611 KIF21AQ7Z4S6 1674 aa5.42□□□□□ -1.54
RN7SKP220-201ENST00000410611 RTN4Q9NQC3 1192 aaKnown RBP5.41□□□□□ -1.54
RN7SKP220-201ENST00000410611 C1QBPQ07021 282 aaKnown RBP5.4□□□□□ -1.54
RN7SKP220-201ENST00000410611 TOPBP1Q92547 1522 aa5.39□□□□□ -1.55
RN7SKP220-201ENST00000410611 IFT140Q96RY7 1462 aa5.38□□□□□ -1.55
RN7SKP220-201ENST00000410611 SOGA1O94964 1423 aa5.37□□□□□ -1.55
RN7SKP220-201ENST00000410611 OSCARQ8IYS5 282 aa5.36□□□□□ -1.55
RN7SKP220-201ENST00000410611 DNMBPQ6XZF7 1577 aa5.36□□□□□ -1.55
RN7SKP220-201ENST00000410611 PRDM2Q13029 1718 aa5.35□□□□□ -1.55
RN7SKP220-201ENST00000410611 POLA1P09884 1462 aaPredicted RBP5.35□□□□□ -1.55
RN7SKP220-201ENST00000410611 CUX1P39880 1505 aa5.34□□□□□ -1.55
RN7SKP220-201ENST00000410611 ZNF608Q9ULD9 1512 aaPredicted RBP5.33□□□□□ -1.56
RN7SKP220-201ENST00000410611 TDRD9Q8NDG6 1382 aaKnown RBP5.33□□□□□ -1.56
RN7SKP220-201ENST00000410611 TARBP1Q13395 1621 aaKnown RBP5.33□□□□□ -1.56
RN7SKP220-201ENST00000410611 AQRO60306 1485 aaKnown RBP eCLIP5.32□□□□□ -1.56
RN7SKP220-201ENST00000410611 RAD54L2Q9Y4B4 1467 aa5.32□□□□□ -1.56
RN7SKP220-201ENST00000410611 WRNQ14191 1432 aaPredicted RBP eCLIP5.32□□□□□ -1.56
RN7SKP220-201ENST00000410611 FGD5Q6ZNL6 1462 aa5.32□□□□□ -1.56
RN7SKP220-201ENST00000410611 TTBK1Q5TCY1 1321 aaPredicted RBP5.3□□□□□ -1.56
RN7SKP220-201ENST00000410611 ABCA10Q8WWZ4 1543 aa5.3□□□□□ -1.56
RN7SKP220-201ENST00000410611 WDR97A6NE52 1622 aa5.29□□□□□ -1.56
RN7SKP220-201ENST00000410611 TOP2BQ02880 1626 aa5.29□□□□□ -1.56
RN7SKP220-201ENST00000410611 GRIN2BQ13224 1484 aa5.28□□□□□ -1.56
RN7SKP220-201ENST00000410611 GAPVD1Q14C86 1478 aa5.27□□□□□ -1.57
RN7SKP220-201ENST00000410611 CHMP7Q8WUX9 453 aaPredicted RBP5.27□□□□□ -1.57
RN7SKP220-201ENST00000410611 IGF1RP08069 1367 aa5.27□□□□□ -1.57
RN7SKP220-201ENST00000410611 MAGI1Q96QZ7 1491 aaPredicted RBP5.26□□□□□ -1.57
RN7SKP220-201ENST00000410611 BIVM-ERCC5R4GMW8 1640 aa5.26□□□□□ -1.57
RN7SKP220-201ENST00000410611 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
RN7SKP220-201ENST00000410611 FBLN2P98095 1184 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms