RNA–Protein interactions for RNA: ENST00000410431.1

RNU4-34P-201, Transcript of RNA, U4 small nuclear 34, pseudogene, humanhuman

BASIC

Gene RNU4-34P, Length 124 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-34P-201ENST00000410431 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.19
RNU4-34P-201ENST00000410431 ABCC9O60706 1549 aa13.06□□□□□ -0.32
RNU4-34P-201ENST00000410431 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
RNU4-34P-201ENST00000410431 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
RNU4-34P-201ENST00000410431 RB1CC1Q8TDY2 1594 aa12.29□□□□□ -0.44
RNU4-34P-201ENST00000410431 NACADO15069 1562 aa12.1□□□□□ -0.47
RNU4-34P-201ENST00000410431 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNU4-34P-201ENST00000410431 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
RNU4-34P-201ENST00000410431 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
RNU4-34P-201ENST00000410431 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
RNU4-34P-201ENST00000410431 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
RNU4-34P-201ENST00000410431 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
RNU4-34P-201ENST00000410431 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
RNU4-34P-201ENST00000410431 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
RNU4-34P-201ENST00000410431 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
RNU4-34P-201ENST00000410431 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
RNU4-34P-201ENST00000410431 CUX2O14529 1486 aa11.49□□□□□ -0.57
RNU4-34P-201ENST00000410431 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
RNU4-34P-201ENST00000410431 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
RNU4-34P-201ENST00000410431 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
RNU4-34P-201ENST00000410431 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
RNU4-34P-201ENST00000410431 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
RNU4-34P-201ENST00000410431 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
RNU4-34P-201ENST00000410431 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
RNU4-34P-201ENST00000410431 NESP48681 1621 aa11.07□□□□□ -0.64
RNU4-34P-201ENST00000410431 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
RNU4-34P-201ENST00000410431 ATAD2BQ9ULI0 1458 aa11.05□□□□□ -0.64
RNU4-34P-201ENST00000410431 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
RNU4-34P-201ENST00000410431 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
RNU4-34P-201ENST00000410431 LAMC3Q9Y6N6 1575 aa11□□□□□ -0.65
RNU4-34P-201ENST00000410431 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
RNU4-34P-201ENST00000410431 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
RNU4-34P-201ENST00000410431 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
RNU4-34P-201ENST00000410431 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
RNU4-34P-201ENST00000410431 SMARCA4P51532 1647 aa10.91□□□□□ -0.66
RNU4-34P-201ENST00000410431 AEBP2Q6ZN18 517 aaPredicted RBP10.9□□□□□ -0.66
RNU4-34P-201ENST00000410431 BAZ1AQ9NRL2 1556 aaPredicted RBP10.89□□□□□ -0.67
RNU4-34P-201ENST00000410431 MRC2Q9UBG0 1479 aa10.86□□□□□ -0.67
RNU4-34P-201ENST00000410431 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
RNU4-34P-201ENST00000410431 WDR62O43379 1518 aa10.84□□□□□ -0.67
RNU4-34P-201ENST00000410431 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
RNU4-34P-201ENST00000410431 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
RNU4-34P-201ENST00000410431 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
RNU4-34P-201ENST00000410431 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
RNU4-34P-201ENST00000410431 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
RNU4-34P-201ENST00000410431 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
RNU4-34P-201ENST00000410431 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
RNU4-34P-201ENST00000410431 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
RNU4-34P-201ENST00000410431 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
RNU4-34P-201ENST00000410431 MROH2BQ7Z745 1585 aa10.67□□□□□ -0.7
RNU4-34P-201ENST00000410431 CFTRP13569 1480 aa10.59□□□□□ -0.71
RNU4-34P-201ENST00000410431 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
RNU4-34P-201ENST00000410431 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
RNU4-34P-201ENST00000410431 ARAP1Q96P48 1450 aa10.54□□□□□ -0.72
RNU4-34P-201ENST00000410431 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
RNU4-34P-201ENST00000410431 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
RNU4-34P-201ENST00000410431 WIZO95785 1651 aa10.5□□□□□ -0.73
RNU4-34P-201ENST00000410431 EIF4G3O43432 1585 aaKnown RBP10.45□□□□□ -0.74
RNU4-34P-201ENST00000410431 FBLN2P98095 1184 aa10.45□□□□□ -0.74
RNU4-34P-201ENST00000410431 CHD1O14646 1710 aa10.44□□□□□ -0.74
RNU4-34P-201ENST00000410431 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
RNU4-34P-201ENST00000410431 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
RNU4-34P-201ENST00000410431 TOPBP1Q92547 1522 aa10.41□□□□□ -0.74
RNU4-34P-201ENST00000410431 AQRO60306 1485 aaKnown RBP eCLIP10.39□□□□□ -0.75
RNU4-34P-201ENST00000410431 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
RNU4-34P-201ENST00000410431 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
RNU4-34P-201ENST00000410431 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
RNU4-34P-201ENST00000410431 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
RNU4-34P-201ENST00000410431 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
RNU4-34P-201ENST00000410431 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
RNU4-34P-201ENST00000410431 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
RNU4-34P-201ENST00000410431 POLA1P09884 1462 aaPredicted RBP10.28□□□□□ -0.76
RNU4-34P-201ENST00000410431 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
RNU4-34P-201ENST00000410431 WDR97A6NE52 1622 aa10.27□□□□□ -0.77
RNU4-34P-201ENST00000410431 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
RNU4-34P-201ENST00000410431 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
RNU4-34P-201ENST00000410431 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
RNU4-34P-201ENST00000410431 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
RNU4-34P-201ENST00000410431 SOGA1O94964 1423 aa10.25□□□□□ -0.77
RNU4-34P-201ENST00000410431 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
RNU4-34P-201ENST00000410431 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
RNU4-34P-201ENST00000410431 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
RNU4-34P-201ENST00000410431 FGD5Q6ZNL6 1462 aa10.15□□□□□ -0.78
RNU4-34P-201ENST00000410431 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
RNU4-34P-201ENST00000410431 KIF13AQ9H1H9 1805 aa10.13□□□□□ -0.79
RNU4-34P-201ENST00000410431 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
RNU4-34P-201ENST00000410431 PBRM1Q86U86 1689 aa10.09□□□□□ -0.79
RNU4-34P-201ENST00000410431 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
RNU4-34P-201ENST00000410431 CEP170Q5SW79 1584 aa10.08□□□□□ -0.8
RNU4-34P-201ENST00000410431 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
RNU4-34P-201ENST00000410431 ABCC10Q5T3U5 1492 aa10.07□□□□□ -0.8
RNU4-34P-201ENST00000410431 NPM1P06748 294 aaKnown RBP eCLIP10.07□□□□□ -0.8
RNU4-34P-201ENST00000410431 KDM6BO15054 1643 aa10.05□□□□□ -0.8
RNU4-34P-201ENST00000410431 CUX1P39880 1505 aa10.05□□□□□ -0.8
RNU4-34P-201ENST00000410431 NUP160Q12769 1436 aa10.05□□□□□ -0.8
RNU4-34P-201ENST00000410431 PHF23Q9BUL5 403 aaPredicted RBP10.04□□□□□ -0.8
RNU4-34P-201ENST00000410431 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
RNU4-34P-201ENST00000410431 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.8
RNU4-34P-201ENST00000410431 ABCA5Q8WWZ7 1642 aa10.02□□□□□ -0.81
RNU4-34P-201ENST00000410431 MAPKBP1O60336 1514 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms