RNA–Protein interactions for RNA: ENST00000410278.1

RN7SKP65-201, Transcript of RNA, 7SK small nuclear pseudogene 65, humanhuman

BASIC

Gene RN7SKP65, Length 313 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP65-201ENST00000410278 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
RN7SKP65-201ENST00000410278 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
RN7SKP65-201ENST00000410278 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
RN7SKP65-201ENST00000410278 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
RN7SKP65-201ENST00000410278 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
RN7SKP65-201ENST00000410278 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
RN7SKP65-201ENST00000410278 ABCC9O60706 1549 aa21.42■■□□□ 1.02
RN7SKP65-201ENST00000410278 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
RN7SKP65-201ENST00000410278 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
RN7SKP65-201ENST00000410278 NACADO15069 1562 aa20.38■□□□□ 0.85
RN7SKP65-201ENST00000410278 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
RN7SKP65-201ENST00000410278 FOXD1Q16676 465 aa20.24■□□□□ 0.83
RN7SKP65-201ENST00000410278 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
RN7SKP65-201ENST00000410278 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
RN7SKP65-201ENST00000410278 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
RN7SKP65-201ENST00000410278 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
RN7SKP65-201ENST00000410278 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
RN7SKP65-201ENST00000410278 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
RN7SKP65-201ENST00000410278 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
RN7SKP65-201ENST00000410278 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
RN7SKP65-201ENST00000410278 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
RN7SKP65-201ENST00000410278 ADRA2BP18089 450 aa19.57■□□□□ 0.72
RN7SKP65-201ENST00000410278 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
RN7SKP65-201ENST00000410278 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
RN7SKP65-201ENST00000410278 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
RN7SKP65-201ENST00000410278 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
RN7SKP65-201ENST00000410278 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
RN7SKP65-201ENST00000410278 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
RN7SKP65-201ENST00000410278 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
RN7SKP65-201ENST00000410278 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
RN7SKP65-201ENST00000410278 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
RN7SKP65-201ENST00000410278 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
RN7SKP65-201ENST00000410278 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
RN7SKP65-201ENST00000410278 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
RN7SKP65-201ENST00000410278 MSH5O43196 834 aa18.66■□□□□ 0.58
RN7SKP65-201ENST00000410278 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
RN7SKP65-201ENST00000410278 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
RN7SKP65-201ENST00000410278 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
RN7SKP65-201ENST00000410278 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
RN7SKP65-201ENST00000410278 NESP48681 1621 aa18.46■□□□□ 0.55
RN7SKP65-201ENST00000410278 WIZO95785 1651 aa18.44■□□□□ 0.54
RN7SKP65-201ENST00000410278 CUX2O14529 1486 aa18.36■□□□□ 0.53
RN7SKP65-201ENST00000410278 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
RN7SKP65-201ENST00000410278 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
RN7SKP65-201ENST00000410278 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
RN7SKP65-201ENST00000410278 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
RN7SKP65-201ENST00000410278 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
RN7SKP65-201ENST00000410278 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
RN7SKP65-201ENST00000410278 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
RN7SKP65-201ENST00000410278 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
RN7SKP65-201ENST00000410278 CFTRP13569 1480 aa18.07■□□□□ 0.48
RN7SKP65-201ENST00000410278 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
RN7SKP65-201ENST00000410278 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
RN7SKP65-201ENST00000410278 CEP164Q9UPV0 1460 aa18.06■□□□□ 0.48
RN7SKP65-201ENST00000410278 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
RN7SKP65-201ENST00000410278 WDR62O43379 1518 aa18.03■□□□□ 0.48
RN7SKP65-201ENST00000410278 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
RN7SKP65-201ENST00000410278 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
RN7SKP65-201ENST00000410278 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
RN7SKP65-201ENST00000410278 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
RN7SKP65-201ENST00000410278 KCNA4P22459 653 aa17.87■□□□□ 0.45
RN7SKP65-201ENST00000410278 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
RN7SKP65-201ENST00000410278 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
RN7SKP65-201ENST00000410278 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
RN7SKP65-201ENST00000410278 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
RN7SKP65-201ENST00000410278 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
RN7SKP65-201ENST00000410278 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
RN7SKP65-201ENST00000410278 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
RN7SKP65-201ENST00000410278 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
RN7SKP65-201ENST00000410278 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
RN7SKP65-201ENST00000410278 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
RN7SKP65-201ENST00000410278 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
RN7SKP65-201ENST00000410278 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
RN7SKP65-201ENST00000410278 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
RN7SKP65-201ENST00000410278 CUX1P39880 1505 aa17.51■□□□□ 0.39
RN7SKP65-201ENST00000410278 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
RN7SKP65-201ENST00000410278 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
RN7SKP65-201ENST00000410278 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
RN7SKP65-201ENST00000410278 SOGA1O94964 1423 aa17.47■□□□□ 0.39
RN7SKP65-201ENST00000410278 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
RN7SKP65-201ENST00000410278 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
RN7SKP65-201ENST00000410278 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
RN7SKP65-201ENST00000410278 CHD1O14646 1710 aa17.41■□□□□ 0.38
RN7SKP65-201ENST00000410278 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
RN7SKP65-201ENST00000410278 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
RN7SKP65-201ENST00000410278 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
RN7SKP65-201ENST00000410278 RIMBP3CA6NJZ7 1639 aa17.33■□□□□ 0.37
RN7SKP65-201ENST00000410278 RIMBP3BA6NNM3 1639 aa17.33■□□□□ 0.37
RN7SKP65-201ENST00000410278 RIMBP3Q9UFD9 1639 aa17.33■□□□□ 0.37
RN7SKP65-201ENST00000410278 FBLN2P98095 1184 aa17.33■□□□□ 0.36
RN7SKP65-201ENST00000410278 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
RN7SKP65-201ENST00000410278 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
RN7SKP65-201ENST00000410278 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
RN7SKP65-201ENST00000410278 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
RN7SKP65-201ENST00000410278 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms