RNA–Protein interactions for RNA: ENST00000409497.5

SCRN1-202, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCRN1, Length 1,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-202ENST00000409497 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
SCRN1-202ENST00000409497 ABCC9O60706 1549 aa13.42□□□□□ -0.26
SCRN1-202ENST00000409497 CCDC180Q9P1Z9 1646 aa13.36□□□□□ -0.27
SCRN1-202ENST00000409497 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
SCRN1-202ENST00000409497 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
SCRN1-202ENST00000409497 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
SCRN1-202ENST00000409497 NACADO15069 1562 aa12.67□□□□□ -0.38
SCRN1-202ENST00000409497 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
SCRN1-202ENST00000409497 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
SCRN1-202ENST00000409497 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCRN1-202ENST00000409497 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
SCRN1-202ENST00000409497 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
SCRN1-202ENST00000409497 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
SCRN1-202ENST00000409497 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
SCRN1-202ENST00000409497 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
SCRN1-202ENST00000409497 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
SCRN1-202ENST00000409497 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
SCRN1-202ENST00000409497 EIF4G1Q04637 1599 aaKnown RBP12.06□□□□□ -0.48
SCRN1-202ENST00000409497 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
SCRN1-202ENST00000409497 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
SCRN1-202ENST00000409497 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
SCRN1-202ENST00000409497 MROH2BQ7Z745 1585 aa11.76□□□□□ -0.53
SCRN1-202ENST00000409497 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
SCRN1-202ENST00000409497 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
SCRN1-202ENST00000409497 SMARCA4P51532 1647 aa11.7□□□□□ -0.54
SCRN1-202ENST00000409497 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
SCRN1-202ENST00000409497 DNAJC5Q9H3Z4 198 aa11.66□□□□□ -0.54
SCRN1-202ENST00000409497 MYT1Q01538 1121 aa11.64□□□□□ -0.55
SCRN1-202ENST00000409497 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
SCRN1-202ENST00000409497 WIZO95785 1651 aa11.64□□□□□ -0.55
SCRN1-202ENST00000409497 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
SCRN1-202ENST00000409497 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
SCRN1-202ENST00000409497 CUX2O14529 1486 aa11.6□□□□□ -0.55
SCRN1-202ENST00000409497 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
SCRN1-202ENST00000409497 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
SCRN1-202ENST00000409497 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
SCRN1-202ENST00000409497 PELP1Q8IZL8 1130 aaKnown RBP11.54□□□□□ -0.56
SCRN1-202ENST00000409497 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
SCRN1-202ENST00000409497 NESP48681 1621 aa11.48□□□□□ -0.57
SCRN1-202ENST00000409497 LAMC3Q9Y6N6 1575 aa11.43□□□□□ -0.58
SCRN1-202ENST00000409497 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
SCRN1-202ENST00000409497 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
SCRN1-202ENST00000409497 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
SCRN1-202ENST00000409497 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
SCRN1-202ENST00000409497 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
SCRN1-202ENST00000409497 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
SCRN1-202ENST00000409497 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
SCRN1-202ENST00000409497 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
SCRN1-202ENST00000409497 WDR62O43379 1518 aa11.22□□□□□ -0.61
SCRN1-202ENST00000409497 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
SCRN1-202ENST00000409497 CFTRP13569 1480 aa11.2□□□□□ -0.62
SCRN1-202ENST00000409497 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
SCRN1-202ENST00000409497 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
SCRN1-202ENST00000409497 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
SCRN1-202ENST00000409497 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SCRN1-202ENST00000409497 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
SCRN1-202ENST00000409497 PRDM2Q13029 1718 aa11.05□□□□□ -0.64
SCRN1-202ENST00000409497 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
SCRN1-202ENST00000409497 IFT140Q96RY7 1462 aa11.01□□□□□ -0.65
SCRN1-202ENST00000409497 CUX1P39880 1505 aa11□□□□□ -0.65
SCRN1-202ENST00000409497 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
SCRN1-202ENST00000409497 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SCRN1-202ENST00000409497 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
SCRN1-202ENST00000409497 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
SCRN1-202ENST00000409497 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
SCRN1-202ENST00000409497 SOGA1O94964 1423 aa10.95□□□□□ -0.66
SCRN1-202ENST00000409497 ZNF608Q9ULD9 1512 aaPredicted RBP10.95□□□□□ -0.66
SCRN1-202ENST00000409497 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
SCRN1-202ENST00000409497 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
SCRN1-202ENST00000409497 RUSC2Q8N2Y8 1516 aa10.91□□□□□ -0.66
SCRN1-202ENST00000409497 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.66
SCRN1-202ENST00000409497 FBLN2P98095 1184 aa10.89□□□□□ -0.67
SCRN1-202ENST00000409497 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
SCRN1-202ENST00000409497 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
SCRN1-202ENST00000409497 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
SCRN1-202ENST00000409497 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
SCRN1-202ENST00000409497 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCRN1-202ENST00000409497 EEA1Q15075 1411 aa10.88□□□□□ -0.67
SCRN1-202ENST00000409497 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
SCRN1-202ENST00000409497 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
SCRN1-202ENST00000409497 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
SCRN1-202ENST00000409497 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
SCRN1-202ENST00000409497 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
SCRN1-202ENST00000409497 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
SCRN1-202ENST00000409497 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
SCRN1-202ENST00000409497 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
SCRN1-202ENST00000409497 KIF27Q86VH2 1401 aa10.83□□□□□ -0.68
SCRN1-202ENST00000409497 CHD1O14646 1710 aa10.82□□□□□ -0.68
SCRN1-202ENST00000409497 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
SCRN1-202ENST00000409497 ABCA10Q8WWZ4 1543 aa10.8□□□□□ -0.68
SCRN1-202ENST00000409497 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
SCRN1-202ENST00000409497 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
SCRN1-202ENST00000409497 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
SCRN1-202ENST00000409497 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
SCRN1-202ENST00000409497 IGF1RP08069 1367 aa10.75□□□□□ -0.69
SCRN1-202ENST00000409497 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
SCRN1-202ENST00000409497 ERICH6Q7L0X2 663 aa10.75□□□□□ -0.69
SCRN1-202ENST00000409497 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
SCRN1-202ENST00000409497 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
SCRN1-202ENST00000409497 PRXQ9BXM0 1461 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms