RNA–Protein interactions for RNA: ENST00000405140.7

CLU-202, Transcript of clusterin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLU, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-202ENST00000405140 NISCHQ9Y2I1 1504 aa30.05■■■□□ 2.4
CLU-202ENST00000405140 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
CLU-202ENST00000405140 ABCC9O60706 1549 aa26.1■■□□□ 1.77
CLU-202ENST00000405140 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
CLU-202ENST00000405140 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
CLU-202ENST00000405140 NACADO15069 1562 aa25.07■■□□□ 1.6
CLU-202ENST00000405140 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
CLU-202ENST00000405140 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
CLU-202ENST00000405140 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
CLU-202ENST00000405140 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
CLU-202ENST00000405140 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
CLU-202ENST00000405140 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
CLU-202ENST00000405140 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
CLU-202ENST00000405140 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
CLU-202ENST00000405140 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
CLU-202ENST00000405140 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
CLU-202ENST00000405140 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
CLU-202ENST00000405140 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
CLU-202ENST00000405140 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
CLU-202ENST00000405140 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
CLU-202ENST00000405140 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
CLU-202ENST00000405140 ATAD2BQ9ULI0 1458 aa23.16■■□□□ 1.3
CLU-202ENST00000405140 SMARCA2P51531 1590 aa23.14■■□□□ 1.3
CLU-202ENST00000405140 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
CLU-202ENST00000405140 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
CLU-202ENST00000405140 HMGXB3Q12766 1538 aa23.04■■□□□ 1.28
CLU-202ENST00000405140 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
CLU-202ENST00000405140 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
CLU-202ENST00000405140 WIZO95785 1651 aa22.99■■□□□ 1.27
CLU-202ENST00000405140 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
CLU-202ENST00000405140 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
CLU-202ENST00000405140 NESP48681 1621 aa22.61■■□□□ 1.21
CLU-202ENST00000405140 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
CLU-202ENST00000405140 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
CLU-202ENST00000405140 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.19
CLU-202ENST00000405140 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
CLU-202ENST00000405140 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
CLU-202ENST00000405140 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
CLU-202ENST00000405140 CFTRP13569 1480 aa22.33■■□□□ 1.17
CLU-202ENST00000405140 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
CLU-202ENST00000405140 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
CLU-202ENST00000405140 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
CLU-202ENST00000405140 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
CLU-202ENST00000405140 CUX2O14529 1486 aa22.19■■□□□ 1.14
CLU-202ENST00000405140 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
CLU-202ENST00000405140 WDR62O43379 1518 aa22.07■■□□□ 1.12
CLU-202ENST00000405140 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
CLU-202ENST00000405140 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
CLU-202ENST00000405140 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
CLU-202ENST00000405140 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
CLU-202ENST00000405140 CUX1P39880 1505 aa21.75■■□□□ 1.07
CLU-202ENST00000405140 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
CLU-202ENST00000405140 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
CLU-202ENST00000405140 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
CLU-202ENST00000405140 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
CLU-202ENST00000405140 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
CLU-202ENST00000405140 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
CLU-202ENST00000405140 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
CLU-202ENST00000405140 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
CLU-202ENST00000405140 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CLU-202ENST00000405140 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
CLU-202ENST00000405140 SOGA1O94964 1423 aa21.6■■□□□ 1.05
CLU-202ENST00000405140 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
CLU-202ENST00000405140 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.04
CLU-202ENST00000405140 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.031e-9■■■□□ 16.1
CLU-202ENST00000405140 WDR97A6NE52 1622 aa21.5■■□□□ 1.03
CLU-202ENST00000405140 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
CLU-202ENST00000405140 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
CLU-202ENST00000405140 ABCA10Q8WWZ4 1543 aa21.43■■□□□ 1.02
CLU-202ENST00000405140 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
CLU-202ENST00000405140 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
CLU-202ENST00000405140 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
CLU-202ENST00000405140 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
CLU-202ENST00000405140 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
CLU-202ENST00000405140 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
CLU-202ENST00000405140 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
CLU-202ENST00000405140 CHD1O14646 1710 aa21.31■■□□□ 1
CLU-202ENST00000405140 MAGI1Q96QZ7 1491 aaPredicted RBP21.28■■□□□ 1
CLU-202ENST00000405140 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
CLU-202ENST00000405140 FBLN2P98095 1184 aa21.25■□□□□ 0.99
CLU-202ENST00000405140 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
CLU-202ENST00000405140 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
CLU-202ENST00000405140 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
CLU-202ENST00000405140 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
CLU-202ENST00000405140 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
CLU-202ENST00000405140 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
CLU-202ENST00000405140 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
CLU-202ENST00000405140 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.97
CLU-202ENST00000405140 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
CLU-202ENST00000405140 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
CLU-202ENST00000405140 IGF1RP08069 1367 aa21.03■□□□□ 0.96
CLU-202ENST00000405140 CUL7Q14999 1698 aa21.03■□□□□ 0.96
CLU-202ENST00000405140 EEA1Q15075 1411 aa21■□□□□ 0.95
CLU-202ENST00000405140 CEP170Q5SW79 1584 aa20.99■□□□□ 0.95
CLU-202ENST00000405140 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
CLU-202ENST00000405140 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
CLU-202ENST00000405140 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
CLU-202ENST00000405140 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
CLU-202ENST00000405140 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
CLU-202ENST00000405140 NUP160Q12769 1436 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms