RNA–Protein interactions for RNA: ENST00000403642.5

CHEK2-207, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,359 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-207ENST00000403642 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
CHEK2-207ENST00000403642 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
CHEK2-207ENST00000403642 ABCC9O60706 1549 aa21.86■■□□□ 1.09
CHEK2-207ENST00000403642 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
CHEK2-207ENST00000403642 NACADO15069 1562 aa20.91■□□□□ 0.94
CHEK2-207ENST00000403642 DCAF8L2P0C7V8 631 aa20.83■□□□□ 0.92
CHEK2-207ENST00000403642 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
CHEK2-207ENST00000403642 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
CHEK2-207ENST00000403642 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
CHEK2-207ENST00000403642 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
CHEK2-207ENST00000403642 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
CHEK2-207ENST00000403642 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHEK2-207ENST00000403642 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
CHEK2-207ENST00000403642 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
CHEK2-207ENST00000403642 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
CHEK2-207ENST00000403642 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
CHEK2-207ENST00000403642 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
CHEK2-207ENST00000403642 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.76
CHEK2-207ENST00000403642 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
CHEK2-207ENST00000403642 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
CHEK2-207ENST00000403642 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
CHEK2-207ENST00000403642 ATAD2BQ9ULI0 1458 aa19.3■□□□□ 0.68
CHEK2-207ENST00000403642 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
CHEK2-207ENST00000403642 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
CHEK2-207ENST00000403642 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
CHEK2-207ENST00000403642 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
CHEK2-207ENST00000403642 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
CHEK2-207ENST00000403642 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
CHEK2-207ENST00000403642 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
CHEK2-207ENST00000403642 WIZO95785 1651 aa19.02■□□□□ 0.64
CHEK2-207ENST00000403642 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
CHEK2-207ENST00000403642 NESP48681 1621 aa18.89■□□□□ 0.61
CHEK2-207ENST00000403642 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
CHEK2-207ENST00000403642 LAMC3Q9Y6N6 1575 aa18.82■□□□□ 0.6
CHEK2-207ENST00000403642 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
CHEK2-207ENST00000403642 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
CHEK2-207ENST00000403642 CUX2O14529 1486 aa18.68■□□□□ 0.58
CHEK2-207ENST00000403642 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
CHEK2-207ENST00000403642 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
CHEK2-207ENST00000403642 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
CHEK2-207ENST00000403642 CFTRP13569 1480 aa18.6■□□□□ 0.57
CHEK2-207ENST00000403642 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
CHEK2-207ENST00000403642 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
CHEK2-207ENST00000403642 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
CHEK2-207ENST00000403642 MRC2Q9UBG0 1479 aa18.51■□□□□ 0.55
CHEK2-207ENST00000403642 WDR62O43379 1518 aa18.47■□□□□ 0.55
CHEK2-207ENST00000403642 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
CHEK2-207ENST00000403642 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
CHEK2-207ENST00000403642 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
CHEK2-207ENST00000403642 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
CHEK2-207ENST00000403642 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
CHEK2-207ENST00000403642 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
CHEK2-207ENST00000403642 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
CHEK2-207ENST00000403642 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
CHEK2-207ENST00000403642 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
CHEK2-207ENST00000403642 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
CHEK2-207ENST00000403642 CUX1P39880 1505 aa18.06■□□□□ 0.48
CHEK2-207ENST00000403642 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
CHEK2-207ENST00000403642 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
CHEK2-207ENST00000403642 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
CHEK2-207ENST00000403642 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
CHEK2-207ENST00000403642 SOGA1O94964 1423 aa17.95■□□□□ 0.46
CHEK2-207ENST00000403642 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.461e-20■■■■■ 27.5
CHEK2-207ENST00000403642 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
CHEK2-207ENST00000403642 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
CHEK2-207ENST00000403642 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
CHEK2-207ENST00000403642 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
CHEK2-207ENST00000403642 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
CHEK2-207ENST00000403642 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
CHEK2-207ENST00000403642 OSCARQ8IYS5 282 aa17.83■□□□□ 0.45
CHEK2-207ENST00000403642 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
CHEK2-207ENST00000403642 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
CHEK2-207ENST00000403642 CHD1O14646 1710 aa17.79■□□□□ 0.44
CHEK2-207ENST00000403642 ABCA5Q8WWZ7 1642 aa17.78■□□□□ 0.44
CHEK2-207ENST00000403642 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
CHEK2-207ENST00000403642 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
CHEK2-207ENST00000403642 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
CHEK2-207ENST00000403642 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
CHEK2-207ENST00000403642 FBLN2P98095 1184 aa17.71■□□□□ 0.43
CHEK2-207ENST00000403642 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
CHEK2-207ENST00000403642 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
CHEK2-207ENST00000403642 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
CHEK2-207ENST00000403642 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
CHEK2-207ENST00000403642 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
CHEK2-207ENST00000403642 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
CHEK2-207ENST00000403642 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
CHEK2-207ENST00000403642 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
CHEK2-207ENST00000403642 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
CHEK2-207ENST00000403642 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
CHEK2-207ENST00000403642 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
CHEK2-207ENST00000403642 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
CHEK2-207ENST00000403642 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
CHEK2-207ENST00000403642 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
CHEK2-207ENST00000403642 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
CHEK2-207ENST00000403642 NUP160Q12769 1436 aa17.48■□□□□ 0.39
CHEK2-207ENST00000403642 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
CHEK2-207ENST00000403642 CUL7Q14999 1698 aa17.43■□□□□ 0.38
CHEK2-207ENST00000403642 IGF1RP08069 1367 aa17.42■□□□□ 0.38
CHEK2-207ENST00000403642 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
CHEK2-207ENST00000403642 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms