RNA–Protein interactions for RNA: ENST00000402604.6

AGAP1-203, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 4

Gene AGAP1, Length 563 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-203ENST00000402604 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
AGAP1-203ENST00000402604 ABCC9O60706 1549 aa29.2■■■□□ 2.26
AGAP1-203ENST00000402604 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
AGAP1-203ENST00000402604 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
AGAP1-203ENST00000402604 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
AGAP1-203ENST00000402604 NACADO15069 1562 aa27.05■■□□□ 1.92
AGAP1-203ENST00000402604 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
AGAP1-203ENST00000402604 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
AGAP1-203ENST00000402604 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
AGAP1-203ENST00000402604 BICRAQ9NZM4 1560 aa26.61■■□□□ 1.85
AGAP1-203ENST00000402604 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
AGAP1-203ENST00000402604 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
AGAP1-203ENST00000402604 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
AGAP1-203ENST00000402604 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
AGAP1-203ENST00000402604 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
AGAP1-203ENST00000402604 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
AGAP1-203ENST00000402604 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
AGAP1-203ENST00000402604 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
AGAP1-203ENST00000402604 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
AGAP1-203ENST00000402604 CUX2O14529 1486 aa25.58■■□□□ 1.69
AGAP1-203ENST00000402604 ERCC6Q03468 1493 aa25.34■■□□□ 1.65
AGAP1-203ENST00000402604 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
AGAP1-203ENST00000402604 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
AGAP1-203ENST00000402604 NESP48681 1621 aa24.8■■□□□ 1.56
AGAP1-203ENST00000402604 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
AGAP1-203ENST00000402604 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
AGAP1-203ENST00000402604 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
AGAP1-203ENST00000402604 SMARCA2P51531 1590 aa24.7■■□□□ 1.54
AGAP1-203ENST00000402604 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
AGAP1-203ENST00000402604 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
AGAP1-203ENST00000402604 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
AGAP1-203ENST00000402604 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
AGAP1-203ENST00000402604 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
AGAP1-203ENST00000402604 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.48
AGAP1-203ENST00000402604 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
AGAP1-203ENST00000402604 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
AGAP1-203ENST00000402604 WDR62O43379 1518 aa24.26■■□□□ 1.47
AGAP1-203ENST00000402604 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
AGAP1-203ENST00000402604 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
AGAP1-203ENST00000402604 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
AGAP1-203ENST00000402604 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
AGAP1-203ENST00000402604 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
AGAP1-203ENST00000402604 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
AGAP1-203ENST00000402604 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
AGAP1-203ENST00000402604 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
AGAP1-203ENST00000402604 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
AGAP1-203ENST00000402604 TRHP20396 242 aaPredicted RBP23.74■■□□□ 1.39
AGAP1-203ENST00000402604 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
AGAP1-203ENST00000402604 CFTRP13569 1480 aa23.71■■□□□ 1.39
AGAP1-203ENST00000402604 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
AGAP1-203ENST00000402604 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
AGAP1-203ENST00000402604 WIZO95785 1651 aa23.66■■□□□ 1.38
AGAP1-203ENST00000402604 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
AGAP1-203ENST00000402604 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
AGAP1-203ENST00000402604 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
AGAP1-203ENST00000402604 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
AGAP1-203ENST00000402604 RSF1Q96T23 1441 aaPredicted RBP23.45■■□□□ 1.34
AGAP1-203ENST00000402604 CHD1O14646 1710 aa23.39■■□□□ 1.34
AGAP1-203ENST00000402604 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
AGAP1-203ENST00000402604 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
AGAP1-203ENST00000402604 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
AGAP1-203ENST00000402604 FBLN2P98095 1184 aa23.3■■□□□ 1.32
AGAP1-203ENST00000402604 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
AGAP1-203ENST00000402604 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.317e-6■■□□□ 12.2
AGAP1-203ENST00000402604 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
AGAP1-203ENST00000402604 TARBP1Q13395 1621 aaKnown RBP23.18■■□□□ 1.3
AGAP1-203ENST00000402604 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
AGAP1-203ENST00000402604 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
AGAP1-203ENST00000402604 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
AGAP1-203ENST00000402604 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
AGAP1-203ENST00000402604 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
AGAP1-203ENST00000402604 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
AGAP1-203ENST00000402604 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
AGAP1-203ENST00000402604 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
AGAP1-203ENST00000402604 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
AGAP1-203ENST00000402604 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
AGAP1-203ENST00000402604 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
AGAP1-203ENST00000402604 SOGA1O94964 1423 aa22.92■■□□□ 1.26
AGAP1-203ENST00000402604 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
AGAP1-203ENST00000402604 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
AGAP1-203ENST00000402604 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
AGAP1-203ENST00000402604 ILDR1Q86SU0 546 aaPredicted RBP22.72■■□□□ 1.23
AGAP1-203ENST00000402604 PBRM1Q86U86 1689 aa22.68■■□□□ 1.22
AGAP1-203ENST00000402604 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
AGAP1-203ENST00000402604 KIF13AQ9H1H9 1805 aa22.62■■□□□ 1.21
AGAP1-203ENST00000402604 CUX1P39880 1505 aa22.62■■□□□ 1.21
AGAP1-203ENST00000402604 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
AGAP1-203ENST00000402604 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
AGAP1-203ENST00000402604 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
AGAP1-203ENST00000402604 NUP160Q12769 1436 aa22.5■■□□□ 1.19
AGAP1-203ENST00000402604 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
AGAP1-203ENST00000402604 KDM4FA0A1W2PPD8 638 aa22.49■■□□□ 1.19
AGAP1-203ENST00000402604 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
AGAP1-203ENST00000402604 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
AGAP1-203ENST00000402604 ABCC10Q5T3U5 1492 aa22.46■■□□□ 1.19
AGAP1-203ENST00000402604 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
AGAP1-203ENST00000402604 KDM6BO15054 1643 aa22.44■■□□□ 1.18
AGAP1-203ENST00000402604 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
AGAP1-203ENST00000402604 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
AGAP1-203ENST00000402604 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms