RNA–Protein interactions for RNA: ENST00000399613.1

PAN3-202, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PAN3, Length 4,940 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-202ENST00000399613 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
PAN3-202ENST00000399613 CCDC180Q9P1Z9 1646 aa12.3□□□□□ -0.44
PAN3-202ENST00000399613 ABCC9O60706 1549 aa11.67□□□□□ -0.54
PAN3-202ENST00000399613 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
PAN3-202ENST00000399613 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
PAN3-202ENST00000399613 NACADO15069 1562 aa11.43□□□□□ -0.58
PAN3-202ENST00000399613 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
PAN3-202ENST00000399613 BICRAQ9NZM4 1560 aa11.35□□□□□ -0.59
PAN3-202ENST00000399613 DCAF1Q9Y4B6 1507 aa11.34□□□□□ -0.59
PAN3-202ENST00000399613 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
PAN3-202ENST00000399613 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
PAN3-202ENST00000399613 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
PAN3-202ENST00000399613 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
PAN3-202ENST00000399613 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
PAN3-202ENST00000399613 SCRIBQ14160 1630 aa10.78□□□□□ -0.68
PAN3-202ENST00000399613 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
PAN3-202ENST00000399613 PEG3Q9GZU2 1588 aa10.65□□□□□ -0.7
PAN3-202ENST00000399613 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
PAN3-202ENST00000399613 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
PAN3-202ENST00000399613 NCAPD3P42695 1498 aa10.52□□□□□ -0.73
PAN3-202ENST00000399613 SMARCA4P51532 1647 aa10.51□□□□□ -0.73
PAN3-202ENST00000399613 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
PAN3-202ENST00000399613 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
PAN3-202ENST00000399613 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
PAN3-202ENST00000399613 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
PAN3-202ENST00000399613 CUX2O14529 1486 aa10.35□□□□□ -0.75
PAN3-202ENST00000399613 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
PAN3-202ENST00000399613 MROH2BQ7Z745 1585 aa10.29□□□□□ -0.76
PAN3-202ENST00000399613 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
PAN3-202ENST00000399613 KIF21AQ7Z4S6 1674 aa10.28□□□□□ -0.76
PAN3-202ENST00000399613 DCAF8L2P0C7V8 631 aa10.26□□□□□ -0.77
PAN3-202ENST00000399613 WDR62O43379 1518 aa10.19□□□□□ -0.78
PAN3-202ENST00000399613 WIZO95785 1651 aa10.19□□□□□ -0.78
PAN3-202ENST00000399613 NESP48681 1621 aa10.17□□□□□ -0.78
PAN3-202ENST00000399613 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
PAN3-202ENST00000399613 DNAJC5Q9H3Z4 198 aa10.1□□□□□ -0.79
PAN3-202ENST00000399613 TOP2AP11388 1531 aaKnown RBP10.09□□□□□ -0.79
PAN3-202ENST00000399613 CFTRP13569 1480 aa10.06□□□□□ -0.8
PAN3-202ENST00000399613 RSF1Q96T23 1441 aaPredicted RBP10.02□□□□□ -0.81
PAN3-202ENST00000399613 MRC2Q9UBG0 1479 aa10□□□□□ -0.81
PAN3-202ENST00000399613 CADPSQ9ULU8 1353 aa10□□□□□ -0.81
PAN3-202ENST00000399613 URB2Q14146 1524 aaKnown RBP9.96□□□□□ -0.81
PAN3-202ENST00000399613 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
PAN3-202ENST00000399613 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
PAN3-202ENST00000399613 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
PAN3-202ENST00000399613 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
PAN3-202ENST00000399613 FANCD2Q9BXW9 1451 aa9.88□□□□□ -0.83
PAN3-202ENST00000399613 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
PAN3-202ENST00000399613 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
PAN3-202ENST00000399613 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
PAN3-202ENST00000399613 EIF4G3O43432 1585 aaKnown RBP9.81□□□□□ -0.84
PAN3-202ENST00000399613 TOPBP1Q92547 1522 aa9.79□□□□□ -0.84
PAN3-202ENST00000399613 CHD1O14646 1710 aa9.77□□□□□ -0.85
PAN3-202ENST00000399613 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
PAN3-202ENST00000399613 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
PAN3-202ENST00000399613 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
PAN3-202ENST00000399613 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
PAN3-202ENST00000399613 IFT140Q96RY7 1462 aa9.75□□□□□ -0.85
PAN3-202ENST00000399613 ABCC8Q09428 1581 aa9.74□□□□□ -0.85
PAN3-202ENST00000399613 ABCA5Q8WWZ7 1642 aa9.73□□□□□ -0.85
PAN3-202ENST00000399613 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
PAN3-202ENST00000399613 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
PAN3-202ENST00000399613 PBRM1Q86U86 1689 aa9.7□□□□□ -0.86
PAN3-202ENST00000399613 CUX1P39880 1505 aa9.69□□□□□ -0.86
PAN3-202ENST00000399613 POLA1P09884 1462 aaPredicted RBP9.67□□□□□ -0.86
PAN3-202ENST00000399613 SHROOM2Q13796 1616 aa9.67□□□□□ -0.86
PAN3-202ENST00000399613 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
PAN3-202ENST00000399613 TOP2BQ02880 1626 aa9.6□□□□□ -0.87
PAN3-202ENST00000399613 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
PAN3-202ENST00000399613 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
PAN3-202ENST00000399613 MAGI1Q96QZ7 1491 aaPredicted RBP9.56□□□□□ -0.88
PAN3-202ENST00000399613 ADAMTS12P58397 1594 aa9.55□□□□□ -0.88
PAN3-202ENST00000399613 FGD5Q6ZNL6 1462 aa9.55□□□□□ -0.88
PAN3-202ENST00000399613 SYNJ1O43426 1573 aa9.53□□□□□ -0.88
PAN3-202ENST00000399613 RAD54L2Q9Y4B4 1467 aa9.52□□□□□ -0.89
PAN3-202ENST00000399613 CEP170Q5SW79 1584 aa9.51□□□□□ -0.89
PAN3-202ENST00000399613 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.89
PAN3-202ENST00000399613 NUP160Q12769 1436 aa9.49□□□□□ -0.89
PAN3-202ENST00000399613 SYNJ2O15056 1496 aa9.48□□□□□ -0.89
PAN3-202ENST00000399613 KIF13AQ9H1H9 1805 aa9.48□□□□□ -0.89
PAN3-202ENST00000399613 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
PAN3-202ENST00000399613 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
PAN3-202ENST00000399613 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
PAN3-202ENST00000399613 RUSC2Q8N2Y8 1516 aa9.45□□□□□ -0.9
PAN3-202ENST00000399613 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
PAN3-202ENST00000399613 SOGA1O94964 1423 aa9.43□□□□□ -0.9
PAN3-202ENST00000399613 OSCARQ8IYS5 282 aa9.43□□□□□ -0.9
PAN3-202ENST00000399613 GRIN2AQ12879 1464 aa9.4□□□□□ -0.9
PAN3-202ENST00000399613 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
PAN3-202ENST00000399613 CUL7Q14999 1698 aa9.36□□□□□ -0.91
PAN3-202ENST00000399613 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
PAN3-202ENST00000399613 ADCY10Q96PN6 1610 aa9.33□□□□□ -0.92
PAN3-202ENST00000399613 MAPKBP1O60336 1514 aa9.33□□□□□ -0.92
PAN3-202ENST00000399613 TDRD9Q8NDG6 1382 aaKnown RBP9.32□□□□□ -0.92
PAN3-202ENST00000399613 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
PAN3-202ENST00000399613 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
PAN3-202ENST00000399613 DIP2BQ9P265 1576 aa9.28□□□□□ -0.92
PAN3-202ENST00000399613 GLI2P10070 1586 aa9.25□□□□□ -0.93
PAN3-202ENST00000399613 MAP3K4Q9Y6R4 1608 aa9.23□□□□□ -0.93
PAN3-202ENST00000399613 CTTNBP2Q8WZ74 1663 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms