RNA–Protein interactions for RNA: ENST00000396993.8

PGAP2-205, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 1 (best) BASIC

Gene PGAP2, Length 1,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-205ENST00000396993 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
PGAP2-205ENST00000396993 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
PGAP2-205ENST00000396993 ABCC9O60706 1549 aa30.86■■■□□ 2.53
PGAP2-205ENST00000396993 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
PGAP2-205ENST00000396993 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
PGAP2-205ENST00000396993 NACADO15069 1562 aa29.49■■■□□ 2.31
PGAP2-205ENST00000396993 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
PGAP2-205ENST00000396993 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.28
PGAP2-205ENST00000396993 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
PGAP2-205ENST00000396993 UNC13AQ9UPW8 1703 aa28.9■■■□□ 2.22
PGAP2-205ENST00000396993 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
PGAP2-205ENST00000396993 BICRAQ9NZM4 1560 aa28.72■■■□□ 2.19
PGAP2-205ENST00000396993 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
PGAP2-205ENST00000396993 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
PGAP2-205ENST00000396993 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
PGAP2-205ENST00000396993 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.06
PGAP2-205ENST00000396993 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
PGAP2-205ENST00000396993 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
PGAP2-205ENST00000396993 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
PGAP2-205ENST00000396993 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
PGAP2-205ENST00000396993 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
PGAP2-205ENST00000396993 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.95
PGAP2-205ENST00000396993 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
PGAP2-205ENST00000396993 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
PGAP2-205ENST00000396993 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
PGAP2-205ENST00000396993 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
PGAP2-205ENST00000396993 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
PGAP2-205ENST00000396993 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
PGAP2-205ENST00000396993 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
PGAP2-205ENST00000396993 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
PGAP2-205ENST00000396993 WIZO95785 1651 aa26.83■■□□□ 1.89
PGAP2-205ENST00000396993 NESP48681 1621 aa26.68■■□□□ 1.86
PGAP2-205ENST00000396993 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
PGAP2-205ENST00000396993 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
PGAP2-205ENST00000396993 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
PGAP2-205ENST00000396993 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
PGAP2-205ENST00000396993 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
PGAP2-205ENST00000396993 CUX2O14529 1486 aa26.35■■□□□ 1.81
PGAP2-205ENST00000396993 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
PGAP2-205ENST00000396993 CFTRP13569 1480 aa26.27■■□□□ 1.8
PGAP2-205ENST00000396993 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
PGAP2-205ENST00000396993 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PGAP2-205ENST00000396993 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
PGAP2-205ENST00000396993 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
PGAP2-205ENST00000396993 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
PGAP2-205ENST00000396993 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
PGAP2-205ENST00000396993 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
PGAP2-205ENST00000396993 WDR62O43379 1518 aa26.02■■□□□ 1.76
PGAP2-205ENST00000396993 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
PGAP2-205ENST00000396993 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
PGAP2-205ENST00000396993 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
PGAP2-205ENST00000396993 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
PGAP2-205ENST00000396993 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
PGAP2-205ENST00000396993 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
PGAP2-205ENST00000396993 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
PGAP2-205ENST00000396993 IFT140Q96RY7 1462 aa25.57■■□□□ 1.68
PGAP2-205ENST00000396993 EEA1Q15075 1411 aa25.57■■□□□ 1.68
PGAP2-205ENST00000396993 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
PGAP2-205ENST00000396993 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
PGAP2-205ENST00000396993 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
PGAP2-205ENST00000396993 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
PGAP2-205ENST00000396993 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.679e-6■■■■■ 50.1
PGAP2-205ENST00000396993 HRCP23327 699 aa25.46■■□□□ 1.67
PGAP2-205ENST00000396993 CUX1P39880 1505 aa25.46■■□□□ 1.67
PGAP2-205ENST00000396993 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
PGAP2-205ENST00000396993 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
PGAP2-205ENST00000396993 SOGA1O94964 1423 aa25.4■■□□□ 1.66
PGAP2-205ENST00000396993 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
PGAP2-205ENST00000396993 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
PGAP2-205ENST00000396993 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
PGAP2-205ENST00000396993 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
PGAP2-205ENST00000396993 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
PGAP2-205ENST00000396993 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
PGAP2-205ENST00000396993 TNIKQ9UKE5 1360 aa25.27■■□□□ 1.64
PGAP2-205ENST00000396993 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
PGAP2-205ENST00000396993 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
PGAP2-205ENST00000396993 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
PGAP2-205ENST00000396993 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
PGAP2-205ENST00000396993 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
PGAP2-205ENST00000396993 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
PGAP2-205ENST00000396993 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.62
PGAP2-205ENST00000396993 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.61
PGAP2-205ENST00000396993 FBLN2P98095 1184 aa25.1■■□□□ 1.61
PGAP2-205ENST00000396993 CEP162Q5TB80 1403 aa25.08■■□□□ 1.61
PGAP2-205ENST00000396993 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
PGAP2-205ENST00000396993 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.61
PGAP2-205ENST00000396993 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
PGAP2-205ENST00000396993 KIF21BO75037 1637 aa25.07■■□□□ 1.6
PGAP2-205ENST00000396993 CHD1O14646 1710 aa25.04■■□□□ 1.6
PGAP2-205ENST00000396993 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
PGAP2-205ENST00000396993 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
PGAP2-205ENST00000396993 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
PGAP2-205ENST00000396993 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
PGAP2-205ENST00000396993 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
PGAP2-205ENST00000396993 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
PGAP2-205ENST00000396993 SYNJ2O15056 1496 aa24.94■■□□□ 1.58
PGAP2-205ENST00000396993 RIMBP3CA6NJZ7 1639 aa24.85■■□□□ 1.57
PGAP2-205ENST00000396993 RIMBP3BA6NNM3 1639 aa24.85■■□□□ 1.57
PGAP2-205ENST00000396993 RIMBP3Q9UFD9 1639 aa24.85■■□□□ 1.57
PGAP2-205ENST00000396993 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms