RNA–Protein interactions for RNA: ENST00000395404.7

TMEM199-202, Transcript of transmembrane protein 199, humanhuman

TSL 5 BASIC

Gene TMEM199, Length 971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-202ENST00000395404 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
TMEM199-202ENST00000395404 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
TMEM199-202ENST00000395404 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
TMEM199-202ENST00000395404 ABCC9O60706 1549 aa18.33■□□□□ 0.53
TMEM199-202ENST00000395404 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
TMEM199-202ENST00000395404 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
TMEM199-202ENST00000395404 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
TMEM199-202ENST00000395404 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
TMEM199-202ENST00000395404 NACADO15069 1562 aa17.2■□□□□ 0.34
TMEM199-202ENST00000395404 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM199-202ENST00000395404 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
TMEM199-202ENST00000395404 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
TMEM199-202ENST00000395404 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
TMEM199-202ENST00000395404 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
TMEM199-202ENST00000395404 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
TMEM199-202ENST00000395404 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
TMEM199-202ENST00000395404 SHROOM4Q9ULL8 1493 aa16.62■□□□□ 0.25
TMEM199-202ENST00000395404 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
TMEM199-202ENST00000395404 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
TMEM199-202ENST00000395404 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
TMEM199-202ENST00000395404 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
TMEM199-202ENST00000395404 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
TMEM199-202ENST00000395404 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
TMEM199-202ENST00000395404 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
TMEM199-202ENST00000395404 FOXD1Q16676 465 aa15.9■□□□□ 0.14
TMEM199-202ENST00000395404 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
TMEM199-202ENST00000395404 CUX2O14529 1486 aa15.89■□□□□ 0.13
TMEM199-202ENST00000395404 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
TMEM199-202ENST00000395404 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
TMEM199-202ENST00000395404 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
TMEM199-202ENST00000395404 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
TMEM199-202ENST00000395404 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
TMEM199-202ENST00000395404 NESP48681 1621 aa15.67■□□□□ 0.1
TMEM199-202ENST00000395404 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
TMEM199-202ENST00000395404 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
TMEM199-202ENST00000395404 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
TMEM199-202ENST00000395404 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
TMEM199-202ENST00000395404 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
TMEM199-202ENST00000395404 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
TMEM199-202ENST00000395404 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
TMEM199-202ENST00000395404 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
TMEM199-202ENST00000395404 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
TMEM199-202ENST00000395404 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
TMEM199-202ENST00000395404 WDR62O43379 1518 aa15.29■□□□□ 0.04
TMEM199-202ENST00000395404 WIZO95785 1651 aa15.28■□□□□ 0.04
TMEM199-202ENST00000395404 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
TMEM199-202ENST00000395404 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
TMEM199-202ENST00000395404 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
TMEM199-202ENST00000395404 CFTRP13569 1480 aa15.2■□□□□ 0.02
TMEM199-202ENST00000395404 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
TMEM199-202ENST00000395404 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
TMEM199-202ENST00000395404 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
TMEM199-202ENST00000395404 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
TMEM199-202ENST00000395404 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
TMEM199-202ENST00000395404 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
TMEM199-202ENST00000395404 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
TMEM199-202ENST00000395404 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
TMEM199-202ENST00000395404 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
TMEM199-202ENST00000395404 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
TMEM199-202ENST00000395404 MSH5O43196 834 aa14.9□□□□□ -0.02
TMEM199-202ENST00000395404 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
TMEM199-202ENST00000395404 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
TMEM199-202ENST00000395404 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
TMEM199-202ENST00000395404 CYB5RLQ6IPT4 315 aa14.87□□□□□ -0.03
TMEM199-202ENST00000395404 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
TMEM199-202ENST00000395404 FBLN2P98095 1184 aa14.84□□□□□ -0.03
TMEM199-202ENST00000395404 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
TMEM199-202ENST00000395404 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
TMEM199-202ENST00000395404 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■■■■■ 26.9
TMEM199-202ENST00000395404 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
TMEM199-202ENST00000395404 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
TMEM199-202ENST00000395404 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
TMEM199-202ENST00000395404 ADRA2BP18089 450 aa14.75□□□□□ -0.05
TMEM199-202ENST00000395404 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
TMEM199-202ENST00000395404 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
TMEM199-202ENST00000395404 SOGA1O94964 1423 aa14.73□□□□□ -0.05
TMEM199-202ENST00000395404 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
TMEM199-202ENST00000395404 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
TMEM199-202ENST00000395404 CHD1O14646 1710 aa14.7□□□□□ -0.06
TMEM199-202ENST00000395404 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
TMEM199-202ENST00000395404 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
TMEM199-202ENST00000395404 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
TMEM199-202ENST00000395404 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
TMEM199-202ENST00000395404 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
TMEM199-202ENST00000395404 WDR97A6NE52 1622 aa14.62□□□□□ -0.07
TMEM199-202ENST00000395404 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
TMEM199-202ENST00000395404 GRIN2BQ13224 1484 aa14.6□□□□□ -0.07
TMEM199-202ENST00000395404 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
TMEM199-202ENST00000395404 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
TMEM199-202ENST00000395404 CUX1P39880 1505 aa14.56□□□□□ -0.08
TMEM199-202ENST00000395404 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
TMEM199-202ENST00000395404 GAPVD1Q14C86 1478 aa14.52□□□□□ -0.08
TMEM199-202ENST00000395404 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.1
TMEM199-202ENST00000395404 PBRM1Q86U86 1689 aa14.43□□□□□ -0.1
TMEM199-202ENST00000395404 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
TMEM199-202ENST00000395404 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
TMEM199-202ENST00000395404 GRIN2AQ12879 1464 aa14.39□□□□□ -0.11
TMEM199-202ENST00000395404 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
TMEM199-202ENST00000395404 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
TMEM199-202ENST00000395404 NUP160Q12769 1436 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms