RNA–Protein interactions for RNA: ENST00000394692.6

RHOT1-204, Transcript of ras homolog family member T1, humanhuman

TSL 2 BASIC

Gene RHOT1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-204ENST00000394692 NISCHQ9Y2I1 1504 aa9.23□□□□□ -0.93
RHOT1-204ENST00000394692 AEBP2Q6ZN18 517 aaPredicted RBP9.12□□□□□ -0.95
RHOT1-204ENST00000394692 CHIC1Q5VXU3 224 aa8.61□□□□□ -1.03
RHOT1-204ENST00000394692 POTEDQ86YR6 584 aa8.49□□□□□ -1.05
RHOT1-204ENST00000394692 ABCC9O60706 1549 aa8.46□□□□□ -1.06
RHOT1-204ENST00000394692 CCDC180Q9P1Z9 1646 aa8.42□□□□□ -1.06
RHOT1-204ENST00000394692 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
RHOT1-204ENST00000394692 DNAJC5BQ9UF47 199 aa7.98□□□□□ -1.13
RHOT1-204ENST00000394692 NACADO15069 1562 aa7.97□□□□□ -1.13
RHOT1-204ENST00000394692 UNC13AQ9UPW8 1703 aa7.87□□□□□ -1.15
RHOT1-204ENST00000394692 SENP3Q9H4L4 574 aaPredicted RBP7.86□□□□□ -1.15
RHOT1-204ENST00000394692 DCAF8L2P0C7V8 631 aa7.82□□□□□ -1.16
RHOT1-204ENST00000394692 MYO15BQ96JP2 1530 aa7.81□□□□□ -1.16
RHOT1-204ENST00000394692 PABPN1Q86U42 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
RHOT1-204ENST00000394692 BICRAQ9NZM4 1560 aa7.77□□□□□ -1.17
RHOT1-204ENST00000394692 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
RHOT1-204ENST00000394692 PHF23Q9BUL5 403 aaPredicted RBP7.71□□□□□ -1.18
RHOT1-204ENST00000394692 CC2D2AQ9P2K1 1620 aa7.66□□□□□ -1.18
RHOT1-204ENST00000394692 DCAF1Q9Y4B6 1507 aa7.66□□□□□ -1.18
RHOT1-204ENST00000394692 CECR2Q9BXF3 1484 aa7.65□□□□□ -1.18
RHOT1-204ENST00000394692 ZCCHC6Q5VYS8 1495 aaKnown RBP7.62□□□□□ -1.19
RHOT1-204ENST00000394692 EIF4G1Q04637 1599 aaKnown RBP7.62□□□□□ -1.19
RHOT1-204ENST00000394692 SCRIBQ14160 1630 aa7.6□□□□□ -1.19
RHOT1-204ENST00000394692 DNAJC5Q9H3Z4 198 aa7.5□□□□□ -1.21
RHOT1-204ENST00000394692 CUX2O14529 1486 aa7.41□□□□□ -1.22
RHOT1-204ENST00000394692 ERCC6Q03468 1493 aa7.36□□□□□ -1.23
RHOT1-204ENST00000394692 NCAPD3P42695 1498 aa7.32□□□□□ -1.24
RHOT1-204ENST00000394692 SMARCA2P51531 1590 aa7.29□□□□□ -1.24
RHOT1-204ENST00000394692 FOXD1Q16676 465 aa7.29□□□□□ -1.24
RHOT1-204ENST00000394692 HMGXB3Q12766 1538 aa7.28□□□□□ -1.24
RHOT1-204ENST00000394692 ATAD2BQ9ULI0 1458 aa7.26□□□□□ -1.25
RHOT1-204ENST00000394692 SMARCA4P51532 1647 aa7.25□□□□□ -1.25
RHOT1-204ENST00000394692 LAMC3Q9Y6N6 1575 aa7.22□□□□□ -1.25
RHOT1-204ENST00000394692 BAZ1BQ9UIG0 1483 aaKnown RBP7.22□□□□□ -1.25
RHOT1-204ENST00000394692 THOC2Q8NI27 1593 aaKnown RBP7.22□□□□□ -1.25
RHOT1-204ENST00000394692 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.25
RHOT1-204ENST00000394692 NESP48681 1621 aa7.21□□□□□ -1.26
RHOT1-204ENST00000394692 PEG3Q9GZU2 1588 aa7.19□□□□□ -1.26
RHOT1-204ENST00000394692 PDS5BQ9NTI5 1447 aa7.17□□□□□ -1.26
RHOT1-204ENST00000394692 KIF21AQ7Z4S6 1674 aa7.17□□□□□ -1.26
RHOT1-204ENST00000394692 TRIM41Q8WV44 630 aa7.11□□□□□ -1.27
RHOT1-204ENST00000394692 PLPPR3Q6T4P5 718 aa7.11□□□□□ -1.27
RHOT1-204ENST00000394692 MRC2Q9UBG0 1479 aa7.1□□□□□ -1.27
RHOT1-204ENST00000394692 WDR62O43379 1518 aa7.09□□□□□ -1.27
RHOT1-204ENST00000394692 CADPSQ9ULU8 1353 aa7.09□□□□□ -1.28
RHOT1-204ENST00000394692 MROH2BQ7Z745 1585 aa7.08□□□□□ -1.28
RHOT1-204ENST00000394692 CEP164Q9UPV0 1460 aa7.05□□□□□ -1.28
RHOT1-204ENST00000394692 WIZO95785 1651 aa7.01□□□□□ -1.29
RHOT1-204ENST00000394692 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
RHOT1-204ENST00000394692 FANCD2Q9BXW9 1451 aa7.01□□□□□ -1.29
RHOT1-204ENST00000394692 PRDM2Q13029 1718 aa6.98□□□□□ -1.29
RHOT1-204ENST00000394692 CFTRP13569 1480 aa6.98□□□□□ -1.29
RHOT1-204ENST00000394692 RIMBP3CA6NJZ7 1639 aa6.95□□□□□ -1.3
RHOT1-204ENST00000394692 RIMBP3BA6NNM3 1639 aa6.95□□□□□ -1.3
RHOT1-204ENST00000394692 RIMBP3Q9UFD9 1639 aa6.95□□□□□ -1.3
RHOT1-204ENST00000394692 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
RHOT1-204ENST00000394692 URB2Q14146 1524 aaKnown RBP6.94□□□□□ -1.3
RHOT1-204ENST00000394692 MSH5O43196 834 aa6.93□□□□□ -1.3
RHOT1-204ENST00000394692 IFT140Q96RY7 1462 aa6.92□□□□□ -1.3
RHOT1-204ENST00000394692 ARHGEF11O15085 1522 aa6.9□□□□□ -1.3
RHOT1-204ENST00000394692 ABCC8Q09428 1581 aa6.89□□□□□ -1.31
RHOT1-204ENST00000394692 RSF1Q96T23 1441 aaPredicted RBP6.88□□□□□ -1.31
RHOT1-204ENST00000394692 EIF4G3O43432 1585 aaKnown RBP6.87□□□□□ -1.31
RHOT1-204ENST00000394692 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
RHOT1-204ENST00000394692 CHD1O14646 1710 aa6.86□□□□□ -1.31
RHOT1-204ENST00000394692 TOPBP1Q92547 1522 aa6.86□□□□□ -1.31
RHOT1-204ENST00000394692 DNMBPQ6XZF7 1577 aa6.85□□□□□ -1.31
RHOT1-204ENST00000394692 CYB5RLQ6IPT4 315 aa6.83□□□□□ -1.32
RHOT1-204ENST00000394692 TRHP20396 242 aaPredicted RBP6.82□□□□□ -1.32
RHOT1-204ENST00000394692 CCDC88BA6NC98 1476 aa6.82□□□□□ -1.32
RHOT1-204ENST00000394692 TARBP1Q13395 1621 aaKnown RBP6.81□□□□□ -1.32
RHOT1-204ENST00000394692 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
RHOT1-204ENST00000394692 ARAP1Q96P48 1450 aa6.81□□□□□ -1.32
RHOT1-204ENST00000394692 PIAS4Q8N2W9 510 aaPredicted RBP6.79□□□□□ -1.32
RHOT1-204ENST00000394692 FBLN2P98095 1184 aa6.78□□□□□ -1.32
RHOT1-204ENST00000394692 AQRO60306 1485 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■□□□ 13.5
RHOT1-204ENST00000394692 SYNJ1O43426 1573 aa6.78□□□□□ -1.32
RHOT1-204ENST00000394692 POLA1P09884 1462 aaPredicted RBP6.77□□□□□ -1.33
RHOT1-204ENST00000394692 CLASP1Q7Z460 1538 aa6.75□□□□□ -1.33
RHOT1-204ENST00000394692 MAGI1Q96QZ7 1491 aaPredicted RBP6.75□□□□□ -1.33
RHOT1-204ENST00000394692 SOGA1O94964 1423 aa6.75□□□□□ -1.33
RHOT1-204ENST00000394692 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
RHOT1-204ENST00000394692 CHMP7Q8WUX9 453 aaPredicted RBP6.73□□□□□ -1.33
RHOT1-204ENST00000394692 GRIN2BQ13224 1484 aa6.72□□□□□ -1.33
RHOT1-204ENST00000394692 RAD54L2Q9Y4B4 1467 aa6.72□□□□□ -1.33
RHOT1-204ENST00000394692 PBRM1Q86U86 1689 aa6.72□□□□□ -1.33
RHOT1-204ENST00000394692 SYNJ2O15056 1496 aa6.72□□□□□ -1.33
RHOT1-204ENST00000394692 FGD5Q6ZNL6 1462 aa6.72□□□□□ -1.33
RHOT1-204ENST00000394692 TDRD9Q8NDG6 1382 aaKnown RBP6.72□□□□□ -1.33
RHOT1-204ENST00000394692 PPP6R1Q9UPN7 881 aa6.7□□□□□ -1.34
RHOT1-204ENST00000394692 GAPVD1Q14C86 1478 aa6.69□□□□□ -1.34
RHOT1-204ENST00000394692 ADRA2BP18089 450 aa6.68□□□□□ -1.34
RHOT1-204ENST00000394692 CUX1P39880 1505 aa6.67□□□□□ -1.34
RHOT1-204ENST00000394692 ABCA5Q8WWZ7 1642 aa6.65□□□□□ -1.34
RHOT1-204ENST00000394692 ABCA10Q8WWZ4 1543 aa6.64□□□□□ -1.35
RHOT1-204ENST00000394692 GRIN2AQ12879 1464 aa6.63□□□□□ -1.35
RHOT1-204ENST00000394692 ADAMTS12P58397 1594 aa6.62□□□□□ -1.35
RHOT1-204ENST00000394692 CEP170Q5SW79 1584 aa6.62□□□□□ -1.35
RHOT1-204ENST00000394692 KIF13AQ9H1H9 1805 aa6.61□□□□□ -1.35
RHOT1-204ENST00000394692 SHROOM2Q13796 1616 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms