RNA–Protein interactions for RNA: ENST00000382366.7

RALGAPA1-202, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RALGAPA1, Length 6,328 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-202ENST00000382366 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
RALGAPA1-202ENST00000382366 NISCHQ9Y2I1 1504 aa10.66□□□□□ -0.7
RALGAPA1-202ENST00000382366 HRCP23327 699 aa10.47□□□□□ -0.73
RALGAPA1-202ENST00000382366 MYT1Q01538 1121 aa10.45□□□□□ -0.74
RALGAPA1-202ENST00000382366 TTBK1Q5TCY1 1321 aaPredicted RBP9.98□□□□□ -0.81
RALGAPA1-202ENST00000382366 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
RALGAPA1-202ENST00000382366 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
RALGAPA1-202ENST00000382366 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
RALGAPA1-202ENST00000382366 ZEB1P37275 1124 aaPredicted RBP9.83□□□□□ -0.84
RALGAPA1-202ENST00000382366 DCAF1Q9Y4B6 1507 aa9.81□□□□□ -0.84
RALGAPA1-202ENST00000382366 CHIC1Q5VXU3 224 aa9.74□□□□□ -0.85
RALGAPA1-202ENST00000382366 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.85
RALGAPA1-202ENST00000382366 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
RALGAPA1-202ENST00000382366 MYO15BQ96JP2 1530 aa9.69□□□□□ -0.86
RALGAPA1-202ENST00000382366 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
RALGAPA1-202ENST00000382366 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
RALGAPA1-202ENST00000382366 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
RALGAPA1-202ENST00000382366 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
RALGAPA1-202ENST00000382366 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
RALGAPA1-202ENST00000382366 BCL11AQ9H165 835 aa9.45□□□□□ -0.9
RALGAPA1-202ENST00000382366 SHROOM4Q9ULL8 1493 aa9.38□□□□□ -0.91
RALGAPA1-202ENST00000382366 LOC105371045A0A1W2PR82 267 aa9.35□□□□□ -0.91
RALGAPA1-202ENST00000382366 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
RALGAPA1-202ENST00000382366 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
RALGAPA1-202ENST00000382366 DIEXFQ68CQ4 756 aaKnown RBP9.33□□□□□ -0.92
RALGAPA1-202ENST00000382366 PRKCSHP14314 528 aaPredicted RBP9.32□□□□□ -0.92
RALGAPA1-202ENST00000382366 CLSPNQ9HAW4 1339 aa9.32□□□□□ -0.92
RALGAPA1-202ENST00000382366 ERICH6Q7L0X2 663 aa9.29□□□□□ -0.92
RALGAPA1-202ENST00000382366 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
RALGAPA1-202ENST00000382366 APLP2Q06481 763 aa9.2□□□□□ -0.94
RALGAPA1-202ENST00000382366 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
RALGAPA1-202ENST00000382366 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
RALGAPA1-202ENST00000382366 ZNF316A6NFI3 1004 aaPredicted RBP9.13□□□□□ -0.95
RALGAPA1-202ENST00000382366 TSHZ2Q9NRE2 1034 aa9.13□□□□□ -0.95
RALGAPA1-202ENST00000382366 CCER1Q8TC90 406 aaPredicted RBP9.13□□□□□ -0.95
RALGAPA1-202ENST00000382366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.08□□□□□ -0.96
RALGAPA1-202ENST00000382366 SUPT16HQ9Y5B9 1047 aaKnown RBP9.06□□□□□ -0.96
RALGAPA1-202ENST00000382366 MIER1Q8N108 512 aa9.03□□□□□ -0.96
RALGAPA1-202ENST00000382366 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
RALGAPA1-202ENST00000382366 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
RALGAPA1-202ENST00000382366 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
RALGAPA1-202ENST00000382366 WRNQ14191 1432 aaPredicted RBP eCLIP8.91□□□□□ -0.98
RALGAPA1-202ENST00000382366 ERICH6BQ5W0A0 696 aa8.89□□□□□ -0.99
RALGAPA1-202ENST00000382366 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
RALGAPA1-202ENST00000382366 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
RALGAPA1-202ENST00000382366 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
RALGAPA1-202ENST00000382366 MSH5O43196 834 aa8.79□□□□□ -1
RALGAPA1-202ENST00000382366 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
RALGAPA1-202ENST00000382366 ABCC9O60706 1549 aa8.75□□□□□ -1.01
RALGAPA1-202ENST00000382366 DEKP35659 375 aaKnown RBP8.73□□□□□ -1.01
RALGAPA1-202ENST00000382366 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.02
RALGAPA1-202ENST00000382366 NEFLP07196 543 aa8.7□□□□□ -1.02
RALGAPA1-202ENST00000382366 FKBP8Q14318 412 aa8.7□□□□□ -1.02
RALGAPA1-202ENST00000382366 TNIKQ9UKE5 1360 aa8.66□□□□□ -1.02
RALGAPA1-202ENST00000382366 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
RALGAPA1-202ENST00000382366 CEP162Q5TB80 1403 aa8.64□□□□□ -1.03
RALGAPA1-202ENST00000382366 BCANQ96GW7 911 aa8.63□□□□□ -1.03
RALGAPA1-202ENST00000382366 RB1CC1Q8TDY2 1594 aa8.63□□□□□ -1.03
RALGAPA1-202ENST00000382366 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
RALGAPA1-202ENST00000382366 CDK11AQ9UQ88 783 aaPredicted RBP8.6□□□□□ -1.03
RALGAPA1-202ENST00000382366 CCER2I3L3R5 266 aa8.58□□□□□ -1.04
RALGAPA1-202ENST00000382366 EEA1Q15075 1411 aa8.58□□□□□ -1.04
RALGAPA1-202ENST00000382366 DHX57Q6P158 1386 aaKnown RBP8.56□□□□□ -1.04
RALGAPA1-202ENST00000382366 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
RALGAPA1-202ENST00000382366 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
RALGAPA1-202ENST00000382366 HNRNPUL2Q1KMD3 747 aaKnown RBP8.54□□□□□ -1.04
RALGAPA1-202ENST00000382366 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
RALGAPA1-202ENST00000382366 WASHC2AQ641Q2 1341 aa8.52□□□□□ -1.05
RALGAPA1-202ENST00000382366 ITGAEP38570 1179 aa8.52□□□□□ -1.05
RALGAPA1-202ENST00000382366 KCNH8Q96L42 1107 aa8.52□□□□□ -1.05
RALGAPA1-202ENST00000382366 NACADO15069 1562 aa8.51□□□□□ -1.05
RALGAPA1-202ENST00000382366 USP35Q9P2H5 1018 aa8.51□□□□□ -1.05
RALGAPA1-202ENST00000382366 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
RALGAPA1-202ENST00000382366 CCDC136Q96JN2 1154 aa8.5□□□□□ -1.05
RALGAPA1-202ENST00000382366 WASHC2CQ9Y4E1 1318 aa8.5□□□□□ -1.05
RALGAPA1-202ENST00000382366 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
RALGAPA1-202ENST00000382366 PKNOX2Q96KN3 472 aa8.49□□□□□ -1.05
RALGAPA1-202ENST00000382366 PPP4R2Q9NY27 417 aa8.49□□□□□ -1.05
RALGAPA1-202ENST00000382366 SLC24A1O60721 1099 aa8.47□□□□□ -1.05
RALGAPA1-202ENST00000382366 DAXXQ9UER7 740 aaPredicted RBP8.47□□□□□ -1.05
RALGAPA1-202ENST00000382366 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
RALGAPA1-202ENST00000382366 PAK3O75914 559 aaPredicted RBP8.45□□□□□ -1.06
RALGAPA1-202ENST00000382366 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
RALGAPA1-202ENST00000382366 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
RALGAPA1-202ENST00000382366 CUX2O14529 1486 aa8.45□□□□□ -1.06
RALGAPA1-202ENST00000382366 IPO9Q96P70 1041 aaKnown RBP8.44□□□□□ -1.06
RALGAPA1-202ENST00000382366 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
RALGAPA1-202ENST00000382366 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
RALGAPA1-202ENST00000382366 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
RALGAPA1-202ENST00000382366 CLIP1P30622 1438 aa8.41□□□□□ -1.06
RALGAPA1-202ENST00000382366 NBR1Q14596 966 aa8.41□□□□□ -1.06
RALGAPA1-202ENST00000382366 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.4□□□□□ -1.06
RALGAPA1-202ENST00000382366 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 GLIPR1L2Q4G1C9 344 aa8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 ANP32CO43423 234 aa8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 ANP32AP39687 249 aaKnown RBP8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 EIF4G1Q04637 1599 aaKnown RBP8.39□□□□□ -1.07
RALGAPA1-202ENST00000382366 CEP164Q9UPV0 1460 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms