RNA–Protein interactions for RNA: ENST00000381006.7

RUFY3-202, Transcript of RUN and FYVE domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RUFY3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-202ENST00000381006 AEBP2Q6ZN18 517 aaPredicted RBP12.5□□□□□ -0.41
RUFY3-202ENST00000381006 CHIC1Q5VXU3 224 aa12.05□□□□□ -0.48
RUFY3-202ENST00000381006 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
RUFY3-202ENST00000381006 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
RUFY3-202ENST00000381006 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
RUFY3-202ENST00000381006 HRCP23327 699 aa10.49□□□□□ -0.73
RUFY3-202ENST00000381006 ABCC9O60706 1549 aa10.48□□□□□ -0.73
RUFY3-202ENST00000381006 MYT1Q01538 1121 aa10.44□□□□□ -0.74
RUFY3-202ENST00000381006 CCDC180Q9P1Z9 1646 aa10.4□□□□□ -0.74
RUFY3-202ENST00000381006 DCAF8L2P0C7V8 631 aa10.35□□□□□ -0.75
RUFY3-202ENST00000381006 SENP3Q9H4L4 574 aaPredicted RBP10.33□□□□□ -0.76
RUFY3-202ENST00000381006 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
RUFY3-202ENST00000381006 ZCCHC6Q5VYS8 1495 aaKnown RBP10.15□□□□□ -0.79
RUFY3-202ENST00000381006 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.79
RUFY3-202ENST00000381006 SUPT5HO00267 1087 aaKnown RBP10.12□□□□□ -0.79
RUFY3-202ENST00000381006 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
RUFY3-202ENST00000381006 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
RUFY3-202ENST00000381006 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
RUFY3-202ENST00000381006 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
RUFY3-202ENST00000381006 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
RUFY3-202ENST00000381006 MYO15BQ96JP2 1530 aa9.88□□□□□ -0.83
RUFY3-202ENST00000381006 NACADO15069 1562 aa9.88□□□□□ -0.83
RUFY3-202ENST00000381006 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
RUFY3-202ENST00000381006 DCAF1Q9Y4B6 1507 aa9.82□□□□□ -0.84
RUFY3-202ENST00000381006 FOXD1Q16676 465 aa9.76□□□□□ -0.85
RUFY3-202ENST00000381006 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
RUFY3-202ENST00000381006 PLPPR3Q6T4P5 718 aa9.75□□□□□ -0.85
RUFY3-202ENST00000381006 TRIM26Q12899 539 aaPredicted RBP9.75□□□□□ -0.85
RUFY3-202ENST00000381006 SCRIBQ14160 1630 aa9.68□□□□□ -0.86
RUFY3-202ENST00000381006 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
RUFY3-202ENST00000381006 DNAJC5BQ9UF47 199 aa9.67□□□□□ -0.86
RUFY3-202ENST00000381006 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
RUFY3-202ENST00000381006 NEUROD1Q13562 356 aa9.67□□□□□ -0.86
RUFY3-202ENST00000381006 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
RUFY3-202ENST00000381006 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
RUFY3-202ENST00000381006 BICRAQ9NZM4 1560 aa9.57□□□□□ -0.88
RUFY3-202ENST00000381006 PPP6R1Q9UPN7 881 aa9.56□□□□□ -0.88
RUFY3-202ENST00000381006 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
RUFY3-202ENST00000381006 ADRA2BP18089 450 aa9.53□□□□□ -0.88
RUFY3-202ENST00000381006 RSF1Q96T23 1441 aaPredicted RBP9.5□□□□□ -0.89
RUFY3-202ENST00000381006 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
RUFY3-202ENST00000381006 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
RUFY3-202ENST00000381006 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
RUFY3-202ENST00000381006 ANP32EQ9BTT0 268 aa9.39□□□□□ -0.91
RUFY3-202ENST00000381006 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
RUFY3-202ENST00000381006 CECR2Q9BXF3 1484 aa9.38□□□□□ -0.91
RUFY3-202ENST00000381006 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
RUFY3-202ENST00000381006 CC2D2AQ9P2K1 1620 aa9.36□□□□□ -0.91
RUFY3-202ENST00000381006 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
RUFY3-202ENST00000381006 MROH2BQ7Z745 1585 aa9.3□□□□□ -0.92
RUFY3-202ENST00000381006 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
RUFY3-202ENST00000381006 WIZO95785 1651 aa9.27□□□□□ -0.93
RUFY3-202ENST00000381006 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
RUFY3-202ENST00000381006 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.93
RUFY3-202ENST00000381006 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
RUFY3-202ENST00000381006 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
RUFY3-202ENST00000381006 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
RUFY3-202ENST00000381006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
RUFY3-202ENST00000381006 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
RUFY3-202ENST00000381006 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
RUFY3-202ENST00000381006 ZNF316A6NFI3 1004 aaPredicted RBP9.18□□□□□ -0.94
RUFY3-202ENST00000381006 SMARCA4P51532 1647 aa9.17□□□□□ -0.94
RUFY3-202ENST00000381006 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
RUFY3-202ENST00000381006 NCAPD3P42695 1498 aa9.15□□□□□ -0.94
RUFY3-202ENST00000381006 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.95
RUFY3-202ENST00000381006 SMARCA2P51531 1590 aa9.14□□□□□ -0.95
RUFY3-202ENST00000381006 APLP2Q06481 763 aa9.14□□□□□ -0.95
RUFY3-202ENST00000381006 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
RUFY3-202ENST00000381006 TOP2AP11388 1531 aaKnown RBP9.13□□□□□ -0.95
RUFY3-202ENST00000381006 MIER1Q8N108 512 aa9.11□□□□□ -0.95
RUFY3-202ENST00000381006 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
RUFY3-202ENST00000381006 ABCC8Q09428 1581 aa9.1□□□□□ -0.95
RUFY3-202ENST00000381006 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
RUFY3-202ENST00000381006 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
RUFY3-202ENST00000381006 WRNQ14191 1432 aaPredicted RBP eCLIP9.06□□□□□ -0.96
RUFY3-202ENST00000381006 CEP162Q5TB80 1403 aa9.04□□□□□ -0.96
RUFY3-202ENST00000381006 HMGXB3Q12766 1538 aa9.03□□□□□ -0.96
RUFY3-202ENST00000381006 NESP48681 1621 aa9.03□□□□□ -0.96
RUFY3-202ENST00000381006 SOGA1O94964 1423 aa9.02□□□□□ -0.97
RUFY3-202ENST00000381006 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
RUFY3-202ENST00000381006 EEA1Q15075 1411 aa9.02□□□□□ -0.97
RUFY3-202ENST00000381006 PEG3Q9GZU2 1588 aa9□□□□□ -0.97
RUFY3-202ENST00000381006 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
RUFY3-202ENST00000381006 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
RUFY3-202ENST00000381006 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
RUFY3-202ENST00000381006 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
RUFY3-202ENST00000381006 GOLGA3Q08378 1498 aa8.96□□□□□ -0.98
RUFY3-202ENST00000381006 RBM19Q9Y4C8 960 aaKnown RBP8.95□□□□□ -0.98
RUFY3-202ENST00000381006 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
RUFY3-202ENST00000381006 CEP164Q9UPV0 1460 aa8.9□□□□□ -0.98
RUFY3-202ENST00000381006 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
RUFY3-202ENST00000381006 KIF21BO75037 1637 aa8.89□□□□□ -0.99
RUFY3-202ENST00000381006 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
RUFY3-202ENST00000381006 LAMC3Q9Y6N6 1575 aa8.88□□□□□ -0.99
RUFY3-202ENST00000381006 BCANQ96GW7 911 aa8.87□□□□□ -0.99
RUFY3-202ENST00000381006 ERICH6BQ5W0A0 696 aa8.86□□□□□ -0.99
RUFY3-202ENST00000381006 CLIP1P30622 1438 aa8.86□□□□□ -0.99
RUFY3-202ENST00000381006 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
RUFY3-202ENST00000381006 NEFLP07196 543 aa8.84□□□□□ -0.99
RUFY3-202ENST00000381006 CFTRP13569 1480 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms